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sw_7_scaffold_1533

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1533_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(62..370)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJ72_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
rps10p; 30S ribosomal protein S10P
sw_7_scaffold_1533_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(374..970)
DNA (597bp) protein (199aa)
Elongation factor 1-alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIE8_9EURY
tef1a; translation elongation factor aEF-1 alpha subunit
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
sw_7_scaffold_1533_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1047..1598
DNA (552bp) protein (184aa)
Os03g0177966; Hypothetical gene. id=24619537 bin=Halonotius_J07HN4 species=Halarchaeum acidiphilum genus=Halarchaeum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Elongation factor TU {ECO:0000313|EMBL:CDB22171.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobact
Os03g0177966; Hypothetical gene.
sw_7_scaffold_1533_4
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2214..2810
DNA (597bp) protein (199aa)
hypothetical protein id=24620457 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ERH02370.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
sw_7_scaffold_1533_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2807..4462
DNA (1656bp) protein (552aa)
FAD dependent oxidoreductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGB3_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:ELZ34511.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum palli
GMC oxidoreductase
sw_7_scaffold_1533_6
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4462..6105
DNA (1644bp) protein (548aa)
Lycopene beta and epsilon cyclase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CHS2_9EURY
Lycopene beta and epsilon cyclase {ECO:0000313|EMBL:ELZ22173.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limico
choline dehydrogenase-like flavoprotein
sw_7_scaffold_1533_7
unknown

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comp(6228..7109)
DNA (882bp) protein (294aa)

This feature has no annotations

sw_7_scaffold_1533_8
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7375..8265
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C2J7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ16537.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_7_scaffold_1533_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8379..9470
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C2J7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ16537.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_7_scaffold_1533_10
unknown

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9787..9957
DNA (171bp) protein (57aa)

This feature has no annotations

sw_7_scaffold_1533_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9961..10689
DNA (729bp) protein (243aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD66_9EURY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ELZ20558.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
sw_7_scaffold_1533_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10929..11519
DNA (591bp) protein (197aa)
50S ribosomal protein L15e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6A6_9EURY
50S ribosomal protein L15e {ECO:0000256|HAMAP-Rule:MF_00256}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
ribosomal protein L15E
sw_7_scaffold_1533_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11571..12497)
DNA (927bp) protein (309aa)
mhpC; 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (EC:3.7.1.-)
2-hydroxy-6-ketonona-24-dienedioic acid hydrolase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LKR8_HALJP
2-hydroxy-6-ketonona-24-dienedioic acid hydrolase {ECO:0000313|EMBL:EMA33673.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
sw_7_scaffold_1533_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12552..13514)
DNA (963bp) protein (321aa)
Phytoene synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D5T9_9EURY
Phytoene synthase {ECO:0000313|EMBL:ELZ30228.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
geranylgeranyl-diphosphate geranylgeranyltransferase
sw_7_scaffold_1533_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13792..14028)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D7U7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30229.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_7_scaffold_1533_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14426..14857)
DNA (432bp) protein (144aa)
Ribonuclease R n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3X3_9EURY
Ribonuclease R {ECO:0000313|EMBL:ELZ30231.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
homolog to ribonuclease R
Displaying 16 items

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