ggKbase home page

sw_7_scaffold_2737

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_2737_1
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..825
DNA (825bp) protein (275aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448, ECO:0000313|EMBL:ELZ31031.1};; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
lysC; aspartate kinase (EC:2.7.2.4)
Aspartokinase n=5 Tax=Halorubrum RepID=M0D6C6_9EURY
sw_7_scaffold_2737_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(822..1478)
DNA (657bp) protein (219aa)
serine/threonine protein phosphatase; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) (EC:3.6.1.41 3.1.3.16)
Serine/threonine protein phosphatase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4N5_9EURY
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EMA52851.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
sw_7_scaffold_2737_3
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1527..2024)
DNA (498bp) protein (166aa)
IMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00705}; EC=3.5.4.10 {ECO:0000256|HAMAP-Rule:MF_00705};; IMP synthase {ECO:0000256|HAMAP-Rule:MF_00705}; Inosinicase {ECO:0000256|HAMAP-Rule:MF_00705}; Tax
purO; IMP cyclohydrolase (EC:3.5.4.10)
IMP cyclohydrolase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3AEE2_9EURY
sw_7_scaffold_2737_4
unknown

Not on your lists

comp(2063..2701)
DNA (639bp) protein (213aa)

This feature has no annotations

sw_7_scaffold_2737_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2709..3065
DNA (357bp) protein (119aa)
Hydrogenase expression/formation protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JZW9_9EURY
hypE; hydrogenase expression/formation protein
Hydrogenase expression/formation protein {ECO:0000313|EMBL:EMA13459.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_7_scaffold_2737_6
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3091..3522
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XBL3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59120.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_7_scaffold_2737_trna_1
unknown

Not on your lists

3581..3653
DNA (73bp)
transferRNA
sw_7_scaffold_2737_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3682..4725)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNQ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24881.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_7_scaffold_2737_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4778..5851)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00038180BD
squalene/phytoene synthase
Squalene/phytoene synthase {ECO:0000313|EMBL:ACV47031.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohata
sw_7_scaffold_2737_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5969..6637
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CX78_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26484.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
HAD superfamily hydrolase
sw_7_scaffold_2737_10
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6693..7487
DNA (795bp) protein (265aa)
Phosphotransferase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J3U7_9EURY
Phosphotransferase {ECO:0000313|EMBL:EMA03621.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.;"
phosphotransferase
sw_7_scaffold_2737_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7527..8330
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNC1_NATM8
hypothetical protein
UCP012666 family protein {ECO:0000313|EMBL:CCQ35418.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_7_scaffold_2737_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8287..9000
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNC1_NATM8
hypothetical protein
UCP012666 family protein {ECO:0000313|EMBL:CCQ35418.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_7_scaffold_2737_13
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9002..9865)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y8U4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY69338.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_7_scaffold_2737_14
unknown

Not on your lists

9968..10144
DNA (177bp) protein (59aa)

This feature has no annotations

sw_7_scaffold_2737_15
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10175..10561)
DNA (387bp) protein (129aa)
30S ribosomal protein S7 n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WBI2_9EURY
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaci
30S ribosomal protein S7
sw_7_scaffold_2737_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10506..11168)
DNA (663bp) protein (221aa)
30S ribosomal protein S12 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU20_NATM8
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
sw_7_scaffold_2737_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11223..12029)
DNA (807bp) protein (269aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N816_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
nusA; putative transcription elongation factor NusA protein
sw_7_scaffold_2737_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12100..14769)
DNA (2670bp) protein (890aa)
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD
sw_7_scaffold_2737_19
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14762..15079)
DNA (318bp) protein (106aa)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:AKH97001.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AKH97001.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN2_NATPD
Displaying 20 items

View Taxonomy