ggKbase home page

sw_7_scaffold_2939

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_2939_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

87..809
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK8_NATM8
hypothetical protein
DUF2103 family protein {ECO:0000313|EMBL:CCQ36078.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
sw_7_scaffold_2939_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

855..1124
DNA (270bp) protein (90aa)
50S ribosomal protein L37Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEB5_9EURY
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
rpl37ae; 50S ribosomal protein L37
sw_7_scaffold_2939_3
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1127..1258
DNA (132bp) protein (44aa)
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;"
DNA-directed RNA polymerase subunit P n=1 Tax=halophilic archaeon J07HX5 RepID=U1N0K1_9EURY
sw_7_scaffold_2939_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1255..1500
DNA (246bp) protein (82aa)
Rpo operon protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NWY8_9EURY
rpo operon protein
Rpo operon protein {ECO:0000313|EMBL:EMA61075.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
sw_7_scaffold_2939_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1593..1985
DNA (393bp) protein (131aa)
Prefoldin subunit beta n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTW2_NATM8
pfdB; prefoldin beta subunit
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
sw_7_scaffold_2939_6
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1985..2233
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JTQ9_9EURY
Protein of unknown function (DUF3194)
Uncharacterized protein {ECO:0000313|EMBL:AGB36367.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_7_scaffold_2939_7
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2216..4087)
DNA (1872bp) protein (624aa)
Putative membrane protein n=1 Tax=Halorubrum sp. J07HR59 RepID=U1NLA1_9EURY
Putative membrane protein {ECO:0000313|EMBL:ERH04360.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
hypothetical protein
sw_7_scaffold_2939_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4183..4290)
DNA (108bp) protein (36aa)
GMP synthase [glutamine-hydrolyzing] subunit A {ECO:0000256|HAMAP-Rule:MF_01510}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_01510};; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_01510}; TaxID=132
GMP synthase [glutamine-hydrolyzing] subunit A n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HBR0_9EURY
GMP synthase, glutamine-hydrolyzing, N-terminal domain or A subunit
sw_7_scaffold_2939_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4287..4613)
DNA (327bp) protein (109aa)
GMP synthase [glutamine-hydrolyzing] subunit A {ECO:0000256|HAMAP-Rule:MF_01510}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_01510};; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_01510}; TaxID=797
guaAa_1; GMP synthase subunit A (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] subunit A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAQ7_9EURY
sw_7_scaffold_2939_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4677..5213)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N902_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54033.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_7_scaffold_2939_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5317..6060
DNA (744bp) protein (248aa)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM28_9EURY
geranylgeranylglyceryl phosphate synthase-like protein
sw_7_scaffold_2939_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6134..7435
DNA (1302bp) protein (434aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ23_9EURY
Aspartyl-tRNA ligase {ECO:0000313|EMBL:ELZ27134.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM
sw_7_scaffold_2939_13
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7725..8357
DNA (633bp) protein (211aa)
pantothenate kinase (EC:2.7.1.33)
Pantothenate kinase {ECO:0000313|EMBL:ADQ68096.1}; EC=2.7.1.33 {ECO:0000313|EMBL:ADQ68096.1};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricu
Pantothenate kinase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSK3_HALBP
sw_7_scaffold_2939_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8400..9176
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMX8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46738.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_2939_15

Not on your lists

9203..9931
DNA (729bp) protein (243aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ESS11579.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ESS11579.1};; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archa
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=uncultured archaeon A07HR60 RepID=V4XSM8_9ARCH
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
sw_7_scaffold_2939_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9936..10985)
DNA (1050bp) protein (350aa)
aspartate transaminase (EC:2.6.1.1)
Class I and II aminotransferase n=1 Tax=Halogranum salarium B-1 RepID=J3JD86_9EURY
Class I and II aminotransferase {ECO:0000313|EMBL:EJN57274.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_7_scaffold_2939_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11072..11470
DNA (399bp) protein (133aa)
RDD domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQH2_9EURY
RDD domain-containing protein {ECO:0000313|EMBL:EFW93236.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
RDD domain-containing protein
Displaying 17 items

View Taxonomy