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sw_7_scaffold_4236

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_4236_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..489)
-----------------
DNA (489bp)
protein (163aa)
Transcription initiation factor IIB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHZ5_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
transcription factor TFIIB cyclin-related protein
sw_7_scaffold_4236_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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778..1062
-----------------
DNA (285bp)
protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KEQ6_HALAR
sw_7_scaffold_4236_3
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1097..2248
-----------------
DNA (1152bp)
protein (384aa)
gatA; glutamyl-tRNA amidotransferase (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=159272
Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Haloarcula hispanica RepID=G0HV39_HALHT
sw_7_scaffold_4236_4
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2315..2458
-----------------
DNA (144bp)
protein (48aa)
Uncharacterized protein n=8 Tax=Haloarcula RepID=G0HR30_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA25595.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_7_scaffold_4236_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2496..3599)
-----------------
DNA (1104bp)
protein (368aa)
Group 1 glycosyl transferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CG66_9EURY
Group 1 glycosyl transferase {ECO:0000313|EMBL:ELZ22265.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
group 1 glycosyl transferase
sw_7_scaffold_4236_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3843..4049
-----------------
DNA (207bp)
protein (69aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
Ribonuclease P protein component 4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CG87_9EURY
RNase P subunit RPR2
sw_7_scaffold_4236_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4135..4389
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIR6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22267.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
putative RNA-binding protein containing KH domain, possibly ribosomal protein
sw_7_scaffold_4236_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4386..5315
-----------------
DNA (930bp)
protein (310aa)
Mechanosensitive ion channel MscS n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CI04_9EURY
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:ELZ22268.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carls
mechanosensitive ion channel MscS
sw_7_scaffold_4236_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5946..6224)
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CM72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24351.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_7_scaffold_4236_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6284..6499)
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P544_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG88667.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
surface glycoprotein precursor
sw_7_scaffold_4236_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6710..7294
-----------------
DNA (585bp)
protein (195aa)
menF; menaquinone-specific isochorismate synthase (EC:5.4.4.2)
Menaquinone-specific isochorismate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR41_9EURY
Menaquinone-specific isochorismate synthase {ECO:0000313|EMBL:ELZ24349.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
Displaying 11 items

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