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sw_8_scaffold_1068

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1068_1
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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497..1624
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WF02_ANEAE
Strain NCTC 7096 contig_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIV59009.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneur
D-alanyl-D-alanine carboxypeptidase
sw_8_scaffold_1068_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1675..2412
DNA (738bp) protein (246aa)
ABC-2 type transport system integral membrane protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H743_SALRM
ABC-2 type transport system integral membrane protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_8_scaffold_1068_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2478..3602
DNA (1125bp) protein (375aa)
Histidine kinase family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4J4_SALRD
histidine kinase family protein
Histidine kinase family {ECO:0000313|EMBL:ABC43797.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_8_scaffold_1068_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3630..4310
DNA (681bp) protein (227aa)
Sensory transduction protein lytR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H741_SALRM
lytR; sensory transduction protein lytR
Sensory transduction protein lytR {ECO:0000313|EMBL:CBH23846.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
sw_8_scaffold_1068_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4315..5271)
DNA (957bp) protein (319aa)
Fructosamine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H732_SALRM
Fructosamine kinase
Fructosamine kinase {ECO:0000313|EMBL:CBH23837.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_8_scaffold_1068_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5374..5931)
DNA (558bp) protein (186aa)
low molecular weight protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] id=24657611 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:ABC45689.1}; EC=3.1.3.48 {ECO:0000313|EMBL:ABC45689.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
low molecular weight protein-tyrosine-phosphatase
sw_8_scaffold_1068_7
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6122..7558)
DNA (1437bp) protein (479aa)
carbohydrate-binding protein SusD n=1 Tax=Salisaeta longa RepID=UPI0003B6C252
SusD/RagB family protein {ECO:0000313|EMBL:EID75884.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotoleran
hypothetical protein
sw_8_scaffold_1068_8
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(7606..10602)
DNA (2997bp) protein (999aa)
TonB-denpendent receptor n=1 Tax=Salisaeta longa RepID=UPI0003B4F980
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AKD02043.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
sw_8_scaffold_1068_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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10910..12466
DNA (1557bp) protein (519aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H730_SALRM
xseA; exodeoxyribonuclease VII large subunit
sw_8_scaffold_1068_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12531..13607
DNA (1077bp) protein (359aa)
hypothetical protein
hypothetical protein id=24657609 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43795.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_8_scaffold_1068_11
RLO_PLX_64_10, Bacteria

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comp(13618..14094)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002E54708
PilT protein domain-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PilT protein domain protein
sw_8_scaffold_1068_12
unknown

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comp(14098..14343)
DNA (246bp) protein (82aa)

This feature has no annotations

sw_8_scaffold_1068_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(14446..15276)
DNA (831bp) protein (277aa)
fabG; 3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=24657608 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CBH23833.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBH23833.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
fabG; 3-oxoacyl-ACP reductase
Displaying 13 items

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