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sw_8_scaffold_131

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_131_1
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..1197
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E5L1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ41659.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
sw_8_scaffold_131_2
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1300..1524)
DNA (225bp) protein (75aa)
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:AKH98730.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halan
sw_8_scaffold_131_3
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1760..3373
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBJ6_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29809.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_8_scaffold_131_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4688..5857
DNA (1170bp) protein (390aa)
DNA polymerase B elongation subunit n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CX83_9EURY
DNA polymerase B elongation subunit {ECO:0000313|EMBL:ELZ27027.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
DNA polymerase elongation subunit (family B)
sw_8_scaffold_131_5
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6221..7192)
DNA (972bp) protein (324aa)
transcriptional regulator TrmB id=24625144 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Putative transcriptional regulator {ECO:0000313|EMBL:ERG97469.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp.
TrmB family transcriptional regulator
sw_8_scaffold_131_6
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7298..8227
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DZ06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40736.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
sw_8_scaffold_131_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8387..9619)
DNA (1233bp) protein (411aa)
D-mannose isomerase (EC:5.3.1.7)
D-mannose isomerase {ECO:0000313|EMBL:CCQ34792.1}; EC=5.3.1.7 {ECO:0000313|EMBL:CCQ34792.1};; Putative isomerase protein {ECO:0000313|EMBL:ERJ07023.1}; EC=5.3.1.9 {ECO:0000313|EMBL:ERJ07023.1};; TaxID
D-mannose isomerase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIL2_9EURY
sw_8_scaffold_131_8
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9612..11660)
DNA (2049bp) protein (683aa)
Amylo-alpha-16-glucosidase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DYW2_9EURY
Amylo-alpha-16-glucosidase {ECO:0000313|EMBL:ELZ40735.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DS
amylo-alpha-1,6-glucosidase
sw_8_scaffold_131_9
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11819..13159
DNA (1341bp) protein (447aa)
Extracellular solute-binding protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E113_9EURY
Extracellular solute-binding protein {ECO:0000313|EMBL:ELZ40738.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum califor
extracellular solute-binding protein
sw_8_scaffold_131_10
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13159..14079
DNA (921bp) protein (307aa)
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein id=24625149 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERG97473.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="
ABC transporter permease
sw_8_scaffold_131_11
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14076..14972
DNA (897bp) protein (299aa)
ABC-type sugar transport system, permease component n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1N3J2_9EURY
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:ERG97474.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="
YcjP
sw_8_scaffold_131_12
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14976..16151
DNA (1176bp) protein (392aa)
ABC transporter id=24625151 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:ERG97475.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Ha
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC
sw_8_scaffold_131_13
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16144..16974
DNA (831bp) protein (277aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
ABC-type sugar transport system, ATPase component n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1PYA3_9EURY
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:ERG97476.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Ha
sw_8_scaffold_131_14
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17559..17921
DNA (363bp) protein (121aa)
Arabinose efflux permease n=1 Tax=halophilic archaeon J07HB67 RepID=U1R0Q8_9EURY
Arabinose efflux permease {ECO:0000313|EMBL:ERH11852.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
multidrug resistance protein-like protein
sw_8_scaffold_131_15
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18382..19335
DNA (954bp) protein (318aa)
TRAP-type transport system,periplasmic protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E1Q7_9EURY
TRAP-type transport system,periplasmic protein {ECO:0000313|EMBL:ELZ41730.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
imp; TRAP-type transport system periplasmic substrate-binding protein
sw_8_scaffold_131_16
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19465..19977
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E5T5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ41729.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_8_scaffold_131_17
unknown

Not on your lists

comp(19970..20518)
DNA (549bp) protein (183aa)

This feature has no annotations

sw_8_scaffold_131_18
unknown

Not on your lists

comp(20717..20872)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_8_scaffold_131_19
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20873..21064)
DNA (192bp) protein (64aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
sw_8_scaffold_131_20
unknown

Not on your lists

comp(21086..21295)
DNA (210bp) protein (70aa)

This feature has no annotations

sw_8_scaffold_131_21
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21821..22513
DNA (693bp) protein (231aa)
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LSF6_HALLT
TRAP transporter 4TM/12TM fusion protein
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:ACM57903.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lac
sw_8_scaffold_131_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22660..22785)
DNA (126bp) protein (42aa)
Fjo21 n=1 Tax=Halogranum salarium B-1 RepID=J2ZJS8_9EURY
Fjo21 {ECO:0000313|EMBL:EJN60975.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_8_scaffold_131_23
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22824..23669)
DNA (846bp) protein (282aa)
Fjo21 n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H5W2_9EURY
Fjo21 {ECO:0000313|EMBL:ELZ79127.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_8_scaffold_131_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23662..24024)
DNA (363bp) protein (121aa)
ArsR family transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD23_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ21145.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
ArsR family transcriptional regulator
sw_8_scaffold_131_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24060..25637
DNA (1578bp) protein (526aa)
Mercuric reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCZ1_9EURY
Mercuric reductase {ECO:0000313|EMBL:ELZ21146.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
mercuric reductase
sw_8_scaffold_131_26
unknown

Not on your lists

25828..25986
DNA (159bp) protein (53aa)

This feature has no annotations

sw_8_scaffold_131_27
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26213..26530)
DNA (318bp) protein (106aa)
GAF sensor signal transduction histidine kinase id=24655772 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
PAS sensor histidine kinase {ECO:0000313|EMBL:ERG89175.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
histidine kinase
sw_8_scaffold_131_28
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26627..28012
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037880B0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48880.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_131_29
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28055..29287)
DNA (1233bp) protein (411aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X7V1_9EURY
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ELY56708.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus am
alcohol dehydrogenase, class IV
sw_8_scaffold_131_30
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29355..29639)
DNA (285bp) protein (95aa)
MoaD family protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X507_9EURY
MoaD family protein {ECO:0000313|EMBL:ELY56707.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 105
moaD_2; molybdopterin converting factor, small subunit 2
Displaying items 1-30 of 41 in total

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