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sw_8_scaffold_135

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_135_1
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..164
DNA (162bp) protein (54aa)
FG-GAP repeat-containing protein n=1 Tax=Pseudomonas syringae BRIP39023 RepID=L7GSW2_PSESX
ASPIC/UnbV domain protein
FG-GAP repeat {ECO:0000313|EMBL:KFG91924.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovora
sw_8_scaffold_135_2
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(446..1690)
DNA (1245bp) protein (415aa)
3-dehydroquinate synthase {ECO:0000313|EMBL:KIE10786.1}; EC=4.2.3.4 {ECO:0000313|EMBL:KIE10786.1};; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="
3-dehydroquinate synthase (EC:4.2.3.4)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00034D15BE
sw_8_scaffold_135_3
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1744..2664)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002E83AD9
Polyprenyltransferase {ECO:0000313|EMBL:KIJ83084.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein
sw_8_scaffold_135_4
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2737..3690)
DNA (954bp) protein (318aa)
hydrolase TatD n=1 Tax=Mastigocladopsis repens RepID=UPI00035D350C
putative metal-dependent hydrolase with TIM-barrel fold
Putative metal-dependent hydrolase with TIM-barrel fold {ECO:0000313|EMBL:AFY54434.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC
sw_8_scaffold_135_5
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3850..4740)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J3B0_NOSP7
Uncharacterized protein {ECO:0000313|EMBL:EKE97725.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
hypothetical protein
sw_8_scaffold_135_6
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5108..6385)
DNA (1278bp) protein (426aa)
All0415 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YZP2_NOSS1
Phosphodiesterase {ECO:0000313|EMBL:KIJ74120.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
sw_8_scaffold_135_7
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6398..7603)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=2 Tax=Chlorogloeopsis sp. Cgs-089 RepID=C0KIE6_9CYAN
Xylose isomerase {ECO:0000313|EMBL:KJH73351.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
sw_8_scaffold_135_8
unknown

Not on your lists

7734..7934
DNA (201bp) protein (67aa)

This feature has no annotations

sw_8_scaffold_135_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7931..8899)
DNA (969bp) protein (323aa)
Transcriptional regulator, DeoR family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFQ7_RHOM4
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ACY47584.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
sw_8_scaffold_135_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9428..12430
DNA (3003bp) protein (1001aa)
Alpha-L-rhamnosidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFR0_RHOM4
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ACY47587.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
sw_8_scaffold_135_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12481..13899
DNA (1419bp) protein (473aa)
Transmembrane prediction n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI38_RHOMR
transmembrane prediction
Transmembrane prediction {ECO:0000313|EMBL:AEN74094.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
sw_8_scaffold_135_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13953..14138
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MFR2_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47589.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_8_scaffold_135_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14197..15474
DNA (1278bp) protein (426aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFR3_RHOM4
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACY47590.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_8_scaffold_135_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15523..16974
DNA (1452bp) protein (484aa)
Rhamnulokinase {ECO:0000313|EMBL:AEN74091.1}; EC=2.7.1.5 {ECO:0000313|EMBL:AEN74091.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodoth
Carbohydrate kinase FGGY n=2 Tax=Rhodothermus marinus RepID=D0MFR4_RHOM4
carbohydrate kinase FGGY
sw_8_scaffold_135_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17041..19233
DNA (2193bp) protein (731aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGU3_RHOMR
rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase {ECO:0000313|EMBL:AEN74090.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
sw_8_scaffold_135_16
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19328..22513
DNA (3186bp) protein (1062aa)
dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00036C39D2
Cytochrome c552 {ECO:0000313|EMBL:EKB49464.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
membrane-bound dehydrogenase domain-containing protein
sw_8_scaffold_135_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22599..23621
DNA (1023bp) protein (341aa)
Trehalose utilization n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DPB7_SINAD
Trehalose utilization
Trehalose utilization {ECO:0000313|EMBL:AGA31102.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidi
sw_8_scaffold_135_18
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23747..24259
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W0Y7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY43120.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
sw_8_scaffold_135_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24335..26521
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZJX5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61020.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
4Fe-4S binding protein
sw_8_scaffold_135_20
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

26616..27839
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI000375AE7C
sulfatase Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
sulfatase
Displaying 20 items

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