ggKbase home page

sw_8_scaffold_1587

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1587_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(476..1000)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL80_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN74597.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_8_scaffold_1587_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1069..1758)
DNA (690bp) protein (230aa)
Outer membrane protein A [Precursor] n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5P1_SALRM
ompA; outer membrane protein A
Outer membrane protein A [Precursor] {ECO:0000313|EMBL:CBH23346.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
sw_8_scaffold_1587_3
unknown

Not on your lists

comp(2365..2847)
DNA (483bp) protein (161aa)

This feature has no annotations

sw_8_scaffold_1587_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2916..4337
DNA (1422bp) protein (474aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y4_SALRM
mesJ; cell cycle protein MesJ
sw_8_scaffold_1587_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4400..4987
DNA (588bp) protein (196aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ABC44161.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ABC44161.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Hypoxanthine phosphoribosyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1V2_SALRD
hpt; hypoxanthine phosphoribosyltransferase
sw_8_scaffold_1587_6
unknown

Not on your lists

comp(4871..5203)
DNA (333bp) protein (111aa)

This feature has no annotations

sw_8_scaffold_1587_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5884..6150
DNA (267bp) protein (89aa)
Asparaginase {ECO:0000313|EMBL:CBH24837.1}; EC=3.5.1.1 {ECO:0000313|EMBL:CBH24837.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
ansA; asparaginase; K01424 L-asparaginase [EC:3.5.1.1] id=24659670 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ansA; asparaginase
sw_8_scaffold_1587_8
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

6238..7392
DNA (1155bp) protein (385aa)
indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8); K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit IorA n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WEZ7_9SPIO
sw_8_scaffold_1587_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7477..8901)
DNA (1425bp) protein (475aa)
Tryptophanase {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909}; EC=4.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909};; L-tryptophan indole-lyase {ECO:0000256|HA
Tryptophanase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Y1_SALRM
tnaA; tryptophanase
sw_8_scaffold_1587_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9027..9551)
DNA (525bp) protein (175aa)
Putative ECF-subfamily sigma factor n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1V5_SALRD
ECF-subfamily sigma factor
Putative ECF-subfamily sigma factor {ECO:0000313|EMBL:ABC45414.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
sw_8_scaffold_1587_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9936..10055)
DNA (120bp) protein (40aa)
phosphohydrolase
phosphohydrolase; K06885 id=24659667 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphohydrolase {ECO:0000313|EMBL:CBH24833.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
Displaying 11 items

View Taxonomy