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sw_8_scaffold_1997

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1997_1
unknown

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3..83
DNA (81bp) protein (27aa)

This feature has no annotations

sw_8_scaffold_1997_2

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156..554
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0S3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04522.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
4-oxalocrotonate tautomerase
sw_8_scaffold_1997_3
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(692..2356)
DNA (1665bp) protein (555aa)
Signal transduction histidine kinase n=1 Tax=Natronococcus occultus SP4 RepID=L0K660_9EURY
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AGB39618.1}; Flags: Precursor;; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source=
sw_8_scaffold_1997_4
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2423..3433)
DNA (1011bp) protein (337aa)
phosphate ABC transporter permease n=1 Tax=Halorubrum sp. T3 RepID=UPI0003613685
Phosphonate ABC transporter inner membrane subunit {ECO:0000313|EMBL:EMA61347.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halo
phosphonate ABC transporter inner membrane subunit
sw_8_scaffold_1997_5

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comp(3430..4275)
DNA (846bp) protein (282aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultu
phosphonate ABC transporter ATPase (EC:3.6.3.28)
Phosphonate ABC transporter, ATP-binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZNY3_9ARCH
sw_8_scaffold_1997_6
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4317..5390)
DNA (1074bp) protein (358aa)
Phosphonate ABC transporter periplasmic phosphonate-binding protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DSL7_9EURY
Phosphonate ABC transporter periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ELZ37109.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubru
phosphonate ABC transporter periplasmic phosphonate-binding protein
sw_8_scaffold_1997_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5560..6204
DNA (645bp) protein (215aa)
hisH; imidazole glycerol phosphate synthase (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=3 Tax=Haloarcula RepID=G0HQA9_HALHT
sw_8_scaffold_1997_8

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6266..7306
DNA (1041bp) protein (347aa)
Poly(3-hydroxyalkanoate) synthetase n=1 Tax=uncultured archaeon A07HR67 RepID=V4X9M5_9ARCH
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:ESS04519.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
sw_8_scaffold_1997_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7520..7882
DNA (363bp) protein (121aa)
50S ribosomal protein L7Ae n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTU6_HALUD
rpl7ae; 50S ribosomal protein L7Ae
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_8_scaffold_1997_10
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7893..8120
DNA (228bp) protein (76aa)
30S ribosomal protein S28e n=8 Tax=Haloarcula RepID=G0HW57_HALHT
rps28e; 30S ribosomal protein S28
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensi
sw_8_scaffold_1997_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8120..8470
DNA (351bp) protein (117aa)
50S ribosomal protein L24 n=1 Tax=Haloarcula marismortui RepID=UPI0000454D28
Uncharacterized protein {ECO:0000313|EMBL:EMA12586.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
rpl24E; 50S ribosomal protein L24
sw_8_scaffold_1997_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8467..8925
DNA (459bp) protein (153aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZG2_HALMD
sw_8_scaffold_1997_13
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8939..9235)
DNA (297bp) protein (99aa)
IS1341-type transposase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R6A7_HALMT
tnp4; IS1341-type transposase
IS1341-type transposase {ECO:0000313|EMBL:AFK19767.1}; Transposase {ECO:0000313|EMBL:AHZ23152.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;
sw_8_scaffold_1997_14
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9228..10256)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TTR3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC40526.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_8_scaffold_1997_15
unknown

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comp(10337..10468)
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 15 items

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