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sw_8_scaffold_2074

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_2074_1
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8..646)
DNA (639bp) protein (213aa)
Transposase n=2 Tax=Halorubrum distributum RepID=M0F1L6_9EURY
Transposase {ECO:0000313|EMBL:ELZ52509.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100.;"
transposase
sw_8_scaffold_2074_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(705..1139)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LD30_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA30998.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_8_scaffold_2074_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1120..3267)
DNA (2148bp) protein (716aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPA5_HALBP
type i restriction-modification system methyltransferase subunit rbh
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ADQ66460.1}; Type i restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:ELY31180.1}; TaxID=46
sw_8_scaffold_2074_4
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3264..3413)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I0N7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ90400.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
sw_8_scaffold_2074_5
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3665..4240
DNA (576bp) protein (192aa)
Xami restriction endonuclease n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I108_9EURY
Xami restriction endonuclease {ECO:0000313|EMBL:ELZ90401.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-
xami restriction endonuclease
sw_8_scaffold_2074_6
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4258..4755)
DNA (498bp) protein (166aa)
Transcription factor n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B797_9EURY
Transcription factor {ECO:0000313|EMBL:ELZ06796.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
transcription factor
sw_8_scaffold_2074_7
unknown

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comp(4821..5255)
DNA (435bp) protein (145aa)

This feature has no annotations

sw_8_scaffold_2074_8
unknown

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comp(5482..5592)
DNA (111bp) protein (37aa)

This feature has no annotations

sw_8_scaffold_2074_9
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5603..6058)
DNA (456bp) protein (152aa)
PTS system, galactitol-specific enzyme II, A component (EC:2.7.1.69)
PTS system, galactitol-specific enzyme II, A component n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G0B6_9EURY
PTS system, galactitol-specific enzyme II, A component {ECO:0000313|EMBL:ELZ65645.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
sw_8_scaffold_2074_10
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6234..6659
DNA (426bp) protein (142aa)
UPF0047 family protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUQ4_HALVD
hypothetical protein
UPF0047 family protein {ECO:0000313|EMBL:ADE04950.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY33699.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
sw_8_scaffold_2074_11
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6726..7517
DNA (792bp) protein (264aa)
Fructose-1,6-bisphosphate aldolase of the DhnA family protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G4B8_9EURY
Fructose-1,6-bisphosphate aldolase of the DhnA family protein {ECO:0000313|EMBL:ELZ65649.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" so
fbaB; fructose-1,6-bisphosphate aldolase of the DhnA family
sw_8_scaffold_2074_12
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7585..8283
DNA (699bp) protein (233aa)
Triosephosphate isomerase {ECO:0000313|EMBL:ELZ79982.1}; EC=5.3.1.1 {ECO:0000313|EMBL:ELZ79982.1};; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofera
tpiA2; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H8C8_9EURY
sw_8_scaffold_2074_13
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8333..8635
DNA (303bp) protein (101aa)
Presumptive arabitol PTS enzyme IIB n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G283_9EURY
Presumptive arabitol PTS enzyme IIB {ECO:0000313|EMBL:ELZ65647.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense
presumptive arabitol PTS enzyme IIB
sw_8_scaffold_2074_14
unknown

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comp(9028..9336)
DNA (309bp) protein (103aa)

This feature has no annotations

sw_8_scaffold_2074_15
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9642..10493
DNA (852bp) protein (284aa)
PTS system, galactitol-specific enzyme II, C component n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G023_9EURY
PTS system, galactitol-specific enzyme II, C component {ECO:0000313|EMBL:ELZ65646.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
PTS system, galactitol-specific enzyme II, C component
sw_8_scaffold_2074_16
unknown

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comp(10726..11322)
DNA (597bp) protein (199aa)

This feature has no annotations

sw_8_scaffold_2074_17
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11465..11671
DNA (207bp) protein (69aa)
Transposase, IS240 {ECO:0000313|EMBL:ELY69593.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 15624
Displaying 17 items

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