ggKbase home page

sw_8_scaffold_2389

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_2389_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..79
DNA (78bp) protein (26aa)
Uncharacterized protein {ECO:0000313|EMBL:CBH22935.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_8_scaffold_2389_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1042..1335)
DNA (294bp) protein (98aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I1_SALRM
ComEC; DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:CBH22936.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_8_scaffold_2389_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1379..3166)
DNA (1788bp) protein (596aa)
DNA internalization-related competence protein ComEC/Rec2 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I1_SALRM
ComEC; DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:CBH22936.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
sw_8_scaffold_2389_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3483..3965
DNA (483bp) protein (161aa)
nusB; transcription antitermination factor NusB
nusB; N utilization substance protein B-like protein; K03625 N utilization substance protein B id=24656826 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=761659 species="Bacteria; Bacte
sw_8_scaffold_2389_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4069..4524
DNA (456bp) protein (152aa)
pphA; Serine/threonine protein phosphatase 1; K07313 serine/threonine protein phosphatase 1 [EC:3.1.3.16] id=24656827 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Serine/threonine protein phosphatase 1 {ECO:0000313|EMBL:CBH22938.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CBH22938.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
pphA; Serine/threonine protein phosphatase 1
sw_8_scaffold_2389_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4654..5751
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I4_SALRM
hypothetical protein
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
sw_8_scaffold_2389_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5893..6771
DNA (879bp) protein (293aa)
hypothetical protein
hypothetical protein id=24656829 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22940.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_8_scaffold_2389_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6840..8105
DNA (1266bp) protein (422aa)
Lipoprotein releasing system transmembrane protein lolC n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4I6_SALRM
lolC; Lipoprotein releasing system transmembrane protein lolC
Lipoprotein releasing system transmembrane protein lolC {ECO:0000313|EMBL:CBH22941.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
sw_8_scaffold_2389_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


8277..8513
DNA (237bp) protein (79aa)
rpmB; 50S ribosomal protein L28
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=24656832 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S Ribosomal protein L28 {ECO:0000313|EMBL:CBH22943.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
sw_8_scaffold_2389_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


8603..8767
DNA (165bp) protein (55aa)
rpmG; 50S ribosomal protein L33
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=24656833 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L33 {ECO:0000255|HAMAP-Rule:MF_00294}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_8_scaffold_2389_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8771..8923
DNA (153bp) protein (51aa)
hypothetical protein
hypothetical protein id=24656834 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22945.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_8_scaffold_2389_trna_1
unknown

Not on your lists

8954..9028
DNA (75bp)
transferRNA
sw_8_scaffold_2389_trna_2
unknown

Not on your lists

9077..9349
DNA (273bp)
transferRNA
sw_8_scaffold_2389_trna_3
unknown

Not on your lists

9431..9501
DNA (71bp)
transferRNA
sw_8_scaffold_2389_12

Not on your lists

9632..10039
DNA (408bp) protein (136aa)
Transcriptional regulator, TetR family n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6ES95_AMYSD
TetR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KKK87977.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 15 items

View Taxonomy