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sw_8_scaffold_2842

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_2842_trna_2
unknown

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comp(27..101)
DNA (75bp)
transferRNA
sw_8_scaffold_2842_trna_1
unknown

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comp(143..216)
DNA (74bp)
transferRNA
sw_8_scaffold_2842_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(568..1011)
DNA (444bp) protein (148aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H834_SALRM
ribE; 6,7-dimethyl-8-ribityllumazine synthase
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
sw_8_scaffold_2842_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(998..1861)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H832_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24187.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_8_scaffold_2842_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2221..2697
DNA (477bp) protein (159aa)
HIT domain-containing protein
HIT domain-containing protein id=24658989 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
HIT domain protein {ECO:0000313|EMBL:ABC45310.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
sw_8_scaffold_2842_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2716..3417
DNA (702bp) protein (234aa)
hypothetical protein
hypothetical protein id=24658988 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44318.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_8_scaffold_2842_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3452..3688
DNA (237bp) protein (79aa)
Uncharacterized ACR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H833_SALRM
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:CBH24188.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
sw_8_scaffold_2842_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3724..4158)
DNA (435bp) protein (145aa)
yqgF; Holliday junction resolvase; K07447 putative holliday junction resolvase [EC:3.1.-.-] id=24658987 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=761659 specie
yqgF; Holliday junction resolvase
sw_8_scaffold_2842_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4181..6421)
DNA (2241bp) protein (747aa)
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:CBH24184.1}; EC=3.1.7.2 {ECO:0000313|EMBL:CBH24184.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H829_SALRM
spoT; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
sw_8_scaffold_2842_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(6600..7262)
DNA (663bp) protein (221aa)
50S ribosomal protein L17 n=2 Tax=Salinibacter ruber RepID=RL17_SALRD
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_8_scaffold_2842_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7332..7652)
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059, ECO:0000313|EMBL:
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=24658983 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rpoA; DNA-directed RNA polymerase subunit alpha
sw_8_scaffold_2842_10
unknown

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7882..8295
DNA (414bp) protein (138aa)

This feature has no annotations

sw_8_scaffold_2842_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(8359..8961)
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=2 Tax=Salinibacter ruber RepID=RS4_SALRD
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
sw_8_scaffold_2842_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(9050..9451)
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H825_SALRM
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310, ECO:0000313|EMBL:CBH24180.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
sw_8_scaffold_2842_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(9530..9913)
DNA (384bp) protein (128aa)
rpsM; 30S ribosomal protein S13
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=24658980 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
sw_8_scaffold_2842_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10007..10228)
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=2 Tax=Salinibacter ruber RepID=IF1_SALRD
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
sw_8_scaffold_2842_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10228..10956)
DNA (729bp) protein (243aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] id=24658978 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
map; methionine aminopeptidase
sw_8_scaffold_2842_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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11518..11847
DNA (330bp) protein (110aa)
Tax=RBG_16_Actinobacteria_68_12_curated
sw_8_scaffold_2842_17
unknown

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comp(11830..12339)
DNA (510bp) protein (170aa)

This feature has no annotations

Displaying 19 items

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