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sw_8_scaffold_3124

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_3124_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1..456)
DNA (456bp) protein (152aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
lepA; GTP-binding protein LepA
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA id=24657256 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_8_scaffold_3124_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(688..1431)
DNA (744bp) protein (248aa)
lspA; signal peptidase (SPase) II; K03101 signal peptidase II [EC:3.4.23.36] id=24657255 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
lspA; signal peptidase (SPase) II
sw_8_scaffold_3124_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1521..3287)
DNA (1767bp) protein (589aa)
NAD(+) synthase; K01950 NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] id=24657254 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
NAD(+) synthase
NAD(+) synthase (Glutamine-hydrolysing) {ECO:0000313|EMBL:ABC43794.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
sw_8_scaffold_3124_4
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4165..4728
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00035E2DF7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ65049.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
sw_8_scaffold_3124_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4877..5518)
DNA (642bp) protein (214aa)
hypothetical protein Hham1_18080 Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
hypothetical protein Hham1_18080 id=3646681 bin=GWC2_Methylomirabilis_70_16 species=Halococcus hamelinensis genus=Halococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sw_8_scaffold_3124_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5528..6487)
DNA (960bp) protein (320aa)
DNA methylase N-4/N-6 domain protein id=4379938 bin=GWA2_Methylomirabilis_73_35 species=Methanoregula boonei genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA methylase N-4/N-6 domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
methyltransferase
sw_8_scaffold_3124_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6587..7231)
DNA (645bp) protein (215aa)
NADH dehydrogenase i, g subunit {ECO:0000313|EMBL:ABC44447.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABC44447.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
NADH dehydrogenase i, g subunit n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5I6_SALRD
nuoG; NADH dehydrogenase i subunit G
sw_8_scaffold_3124_8
unknown

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7906..8313
DNA (408bp) protein (136aa)

This feature has no annotations

sw_8_scaffold_3124_9
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8392..9066)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4S7_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE13350.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
sw_8_scaffold_3124_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9085..9516)
DNA (432bp) protein (144aa)
hypothetical protein
hypothetical protein id=24657250 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44835.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_8_scaffold_3124_11
unknown

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comp(9513..9893)
DNA (381bp) protein (127aa)

This feature has no annotations

Displaying 11 items

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