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sw_8_scaffold_3880

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_3880_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..565
DNA (564bp) protein (188aa)
Zinc-transporting ATPase protein {ECO:0000313|EMBL:ERJ06511.1}; EC=3.6.3.12 {ECO:0000313|EMBL:ERJ06511.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Zinc-transporting ATPase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E3K0_9EURY
ctpC; cation-transporting ATPase
sw_8_scaffold_3880_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(626..913)
DNA (288bp) protein (96aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JN68_NATP1
putative DNA binding protein
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:ELY72355.1}; Putative DNA binding protein {ECO:0000313|EMBL:AGB31801.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobact
sw_8_scaffold_3880_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(907..1278)
DNA (372bp) protein (124aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DEA0_HALXS
Bacterio-opsin activator HTH domain-containing protein
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:AEH39382.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanad
sw_8_scaffold_3880_4
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1339..1587)
DNA (249bp) protein (83aa)
Transcription regulator-like protein (Fragment) n=1 Tax=Haloferax sp. BAB2207 RepID=L5NFM0_9EURY
Transcription regulator-like protein {ECO:0000313|EMBL:ELK49456.1}; Flags: Fragment;; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="H
transcription regulator-like protein
sw_8_scaffold_3880_5
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1612..2466
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=O54661_HALSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAC82944.1}; Vng6066c {ECO:0000313|EMBL:AAG20755.1}; Vng6460c {ECO:0000313|EMBL:AAG21053.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Haloba
sw_8_scaffold_3880_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2466..3728
DNA (1263bp) protein (421aa)
Major facilitator superfamily protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9A5_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:ELZ32036.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
major facilitator superfamily protein
sw_8_scaffold_3880_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3754..4002)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21144.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_8_scaffold_3880_8
unknown

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4274..4999
DNA (726bp) protein (242aa)

This feature has no annotations

sw_8_scaffold_3880_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4993..5286
DNA (294bp) protein (98aa)
Na+/proline symporter {ECO:0000313|EMBL:CDM64451.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sw_8_scaffold_3880_10
RLO_OD1_Nomurabacteria_46_14, Nomurabacteria, Parcubacteria, Bacteria

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5436..6350
DNA (915bp) protein (305aa)
Na+/solute symporter n=1 Tax=Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) RepID=E1SL46_FERBD
Na+/proline symporter Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_46_14_curated
Na+/solute symporter
sw_8_scaffold_3880_11
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6379..6999
DNA (621bp) protein (207aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LWQ0_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA37901.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Ha
Bacterio-opsin activator HTH domain-containing protein
sw_8_scaffold_3880_12
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7140..7682
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C8Q4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ19641.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_8_scaffold_3880_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7739..8002)
DNA (264bp) protein (88aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LWQ0_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA37901.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Ha
Bacterio-opsin activator HTH domain-containing protein
Displaying 13 items

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