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sw_8_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_48_1
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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159..1553
DNA (1395bp) protein (465aa)
Signal recognition particle 54 kDa protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DTC2_9EURY
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales
GTP-binding signal recognition particle SRP54 G-domain protein
sw_8_scaffold_48_2
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1658..2878
DNA (1221bp) protein (407aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E9R2_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ELZ44490.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense
major facilitator superfamily MFS_1 rbh
sw_8_scaffold_48_3
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2914..3963)
DNA (1050bp) protein (350aa)
hypothetical protein id=24620789 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ELZ35796.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_48_4
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4039..4503)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DM49_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35797.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_48_5
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4610..6421
DNA (1812bp) protein (604aa)
PHP domain protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FJB0_9EURY
PHP domain protein {ECO:0000313|EMBL:ELZ59372.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;
PHP domain protein rbh
sw_8_scaffold_48_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6422..6964
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FH51_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ59371.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_48_7
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7015..7749
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EDK7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ44494.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_8_scaffold_48_8
unknown

Not on your lists

7958..8371
DNA (414bp) protein (138aa)

This feature has no annotations

sw_8_scaffold_48_9
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8239..9024)
DNA (786bp) protein (262aa)
Methyltransferase type 11 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0D935_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:ELZ31981.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM
methyltransferase type 11
sw_8_scaffold_48_10
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9134..9598)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00036CEC34
Uncharacterized protein {ECO:0000313|EMBL:ELZ31982.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_48_11
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9670..10506)
DNA (837bp) protein (279aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EBW7_9EURY
sw_8_scaffold_48_12
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10574..11446)
DNA (873bp) protein (291aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DCW1_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:ELZ31984.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquich
biotin/lipoate A/B protein ligase
sw_8_scaffold_48_13
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11612..12568)
DNA (957bp) protein (319aa)
PfkB domain protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0D926_9EURY
PfkB domain protein {ECO:0000313|EMBL:ELZ31985.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210
PfkB domain protein rbh
sw_8_scaffold_48_14
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12674..14713)
DNA (2040bp) protein (680aa)
Alpha-galactosidase-like protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0D940_9EURY
Alpha-galactosidase-like protein {ECO:0000313|EMBL:ELZ31986.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquiche
Alpha-galactosidase-like protein
sw_8_scaffold_48_15
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14828..16933
DNA (2106bp) protein (702aa)
Glycoside hydrolase family 42 domain protein (EC:3.2.1.23)
Glycoside hydrolase family 42 domain protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DB73_9EURY
Glycoside hydrolase family 42 domain protein {ECO:0000313|EMBL:ELZ31987.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
sw_8_scaffold_48_16
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16999..17853)
DNA (855bp) protein (285aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DB43_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ31988.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebe
short-chain dehydrogenase/reductase SDR
sw_8_scaffold_48_17
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17933..19081)
DNA (1149bp) protein (383aa)
Galactonate dehydratase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DCX9_9EURY
Galactonate dehydratase {ECO:0000313|EMBL:ELZ31989.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
galactonate dehydratase
sw_8_scaffold_48_18
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19086..20207)
DNA (1122bp) protein (374aa)
ABC transporter {ECO:0000313|EMBL:CDK39435.1}; EC=3.6.3.20 {ECO:0000313|EMBL:CDK39435.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
ABC transporter n=1 Tax=Halorubrum sp. AJ67 RepID=V6DV70_9EURY
ABC transporter
sw_8_scaffold_48_19
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20211..21047)
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0D953_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ELZ31991.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubr
binding-protein-dependent transport systems inner membrane component
sw_8_scaffold_48_20
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21047..22117)
DNA (1071bp) protein (357aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halorubrum sp. AJ67 RepID=V6DTD1_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDK39437.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubr
binding-protein-dependent transport systems inner membrane component rbh
sw_8_scaffold_48_21
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22136..23503)
DNA (1368bp) protein (456aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DB54_9EURY
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ELZ31993.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
extracellular solute-binding protein family 1
sw_8_scaffold_48_22
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23782..24528
DNA (747bp) protein (249aa)
Transcriptional regulator, IclR family protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DCZ0_9EURY
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:ELZ31994.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
transcriptional regulator, IclR family
sw_8_scaffold_48_23
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24584..25222
DNA (639bp) protein (213aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FH39_9EURY
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:ELZ59361.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase rbh
sw_8_scaffold_48_24
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25512..26426
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0D9E9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32086.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein rbh
sw_8_scaffold_48_25
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26601..26858
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E9Q5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ44506.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
sw_8_scaffold_48_26
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26911..27972)
DNA (1062bp) protein (354aa)
Transcriptional regulator, TrmB n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FHC4_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ELZ59350.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium
transcriptional regulator, TrmB rbh
sw_8_scaffold_48_27
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28065..30521)
DNA (2457bp) protein (819aa)
Alpha amylase catalytic region n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FL82_9EURY
Alpha amylase catalytic region {ECO:0000313|EMBL:ELZ59349.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium A
alpha amylase catalytic region
sw_8_scaffold_48_28
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30626..32824
DNA (2199bp) protein (733aa)
Glucan 14-alpha-glucosidase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DD59_9EURY
Glucan 14-alpha-glucosidase {ECO:0000313|EMBL:ELZ32074.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense D
glucan 14-alpha-glucosidase rbh
sw_8_scaffold_48_29
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33116..33301)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E9U3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ44510.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_8_scaffold_48_30
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33386..34204)
DNA (819bp) protein (273aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013, ECO:0000313|EMBL:ELZ50362.1}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013, ECO:0000313|EMBL:ELZ50362.1};; IGP synth
Imidazole glycerol phosphate synthase subunit HisF n=5 Tax=Halorubrum RepID=M0DIX5_9EURY
imidazole glycerol phosphate synthase subunit HisF
Displaying items 1-30 of 38 in total

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