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sw_8_scaffold_493

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_493_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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387..1448
DNA (1062bp) protein (354aa)
gdh; glucose 1-dehydrogenase (EC:1.1.1.47)
Glucose 1-dehydrogenase {ECO:0000313|EMBL:CCQ35599.1}; EC=1.1.1.47 {ECO:0000313|EMBL:CCQ35599.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Glucose 1-dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNQ5_NATM8
sw_8_scaffold_493_2
uncultured haloarchaeon FLAS10H9, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1521..2582
DNA (1062bp) protein (354aa)
Probable transcription regulator n=1 Tax=uncultured haloarchaeon FLAS10H9 RepID=A7U0T0_9EURY
Probable transcription regulator {ECO:0000313|EMBL:ABT17361.1}; TaxID=447098 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental samples.;" source="uncultur
TrmB family transcription regulator
sw_8_scaffold_493_3
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2668..3126
DNA (459bp) protein (153aa)
Universal stress protein UspA related nucleotide-binding protein n=1 Tax=Halorubrum sp. J07HR59 RepID=U1QGK4_9EURY
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ERH04502.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;
UspA domain-containing protein
sw_8_scaffold_493_4
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3236..4156
DNA (921bp) protein (307aa)
Oxidoreductase n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HP86_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ86326.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;"
oxidoreductase
sw_8_scaffold_493_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4196..4567)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGR5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60364.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_8_scaffold_493_6
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4891..5481)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PDX0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA67005.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_8_scaffold_493_7
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5537..6355)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PAX3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66699.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_8_scaffold_493_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6481..6918)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PC08_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA67064.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_8_scaffold_493_9
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7441..8844
DNA (1404bp) protein (468aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P9I6_9EURY
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EMA66701.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
extracellular solute-binding protein family 1
sw_8_scaffold_493_10
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8905..9870
DNA (966bp) protein (322aa)
Sugar ABC transporter permease n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E056_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:ELZ41136.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum
binding-protein-dependent transporters inner membrane component
sw_8_scaffold_493_11
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9872..10840
DNA (969bp) protein (323aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PAM8_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA67061.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
binding-protein-dependent transporters inner membrane component
sw_8_scaffold_493_12

Not on your lists

10843..11970
DNA (1128bp) protein (376aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZLT9_9ARCH
ABC transporter
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ESS03420.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_8_scaffold_493_13
unknown

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12123..12566
DNA (444bp) protein (148aa)

This feature has no annotations

sw_8_scaffold_493_14

Not on your lists

comp(12751..14175)
DNA (1425bp) protein (475aa)
oligo-1,6-glucosidase, family GH13 (EC:3.2.1.10)
Glycosidase n=2 Tax=Archaea RepID=V4XSD8_9ARCH
Glycosidase {ECO:0000313|EMBL:ESS11469.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_8_scaffold_493_15
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14490..14780
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PA22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66698.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
sw_8_scaffold_493_16
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(14827..15900)
DNA (1074bp) protein (358aa)
Transcriptional regulator, TrmB n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E444_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ELZ41139.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovoru
transcriptional regulator, TrmB
sw_8_scaffold_493_17
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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16220..17452
DNA (1233bp) protein (411aa)
glycoside hydrolase family 68 (EC:2.4.1.10)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003629FA5
Glycoside hydrolase family 68 {ECO:0000313|EMBL:EMA57027.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DS
sw_8_scaffold_493_18
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(18845..19633)
DNA (789bp) protein (263aa)
Glycosyl hydrolase family 32 domain protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LT94_HALLT
glycosyl hydrolase family 32
Glycosyl hydrolase family 32 domain protein {ECO:0000313|EMBL:ACM58066.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum l
sw_8_scaffold_493_19
unknown

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19894..20055
DNA (162bp) protein (54aa)

This feature has no annotations

sw_8_scaffold_493_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20136..20765
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4V6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29732.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
DUF192 family protein
Displaying 20 items

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