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sw_8_scaffold_5788

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_5788_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1538)
DNA (1536bp) protein (512aa)
Signal recognition particle receptor FtsY n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UY25_HALMA
dpa; signal recognition particle receptor
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Halofer
sw_8_scaffold_5788_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1584..2066)
DNA (483bp) protein (161aa)
Prefoldin subunit alpha n=1 Tax=halophilic archaeon J07HX64 RepID=U1P039_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source=
pfdA; prefoldin alpha subunit
sw_8_scaffold_5788_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2063..2236)
DNA (174bp) protein (58aa)
50S ribosomal protein L18Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D464_9EURY
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=797114 sp
rplX; 50S ribosomal protein LX
sw_8_scaffold_5788_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2478..2840
DNA (363bp) protein (121aa)
50S ribosomal protein L7Ae n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS64_9EURY
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
rpl7ae; 50S ribosomal protein L7Ae
sw_8_scaffold_5788_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2941..3171
DNA (231bp) protein (77aa)
30S ribosomal protein S28e n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZG0_HALMD
30S ribosomal protein S28e
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muko
sw_8_scaffold_5788_6
unknown

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comp(3123..3587)
DNA (465bp) protein (155aa)

This feature has no annotations

sw_8_scaffold_5788_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3679..4143
DNA (465bp) protein (155aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=NDK_HALMA
sw_8_scaffold_5788_8
unknown

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comp(4374..4514)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 8 items

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