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sw_8_scaffold_6187

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_6187_1
unknown

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1..120
DNA (120bp) protein (40aa)

This feature has no annotations

sw_8_scaffold_6187_2
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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164..361
DNA (198bp) protein (66aa)
hypothetical protein id=24624749 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Uncharacterized protein {ECO:0000313|EMBL:ERH00075.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
hypothetical protein
sw_8_scaffold_6187_3
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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590..2224
DNA (1635bp) protein (545aa)
cdc48d; AAA-type ATPase id=24624751 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
ATPase of the AAA+ class {ECO:0000313|EMBL:ERH00076.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.
aaa3; ATPase AAA
sw_8_scaffold_6187_4
uncultured haloarchaeon FLAS10H9, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2200..2427)
DNA (228bp) protein (76aa)
Bacteriorhodopsin-associated protein n=1 Tax=uncultured haloarchaeon FLAS10H9 RepID=A7U0U2_9EURY
Bacteriorhodopsin-associated protein {ECO:0000313|EMBL:ABT17373.1}; TaxID=447098 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental samples.;" source="uncu
hypothetical protein
sw_8_scaffold_6187_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2487..3161)
DNA (675bp) protein (225aa)
Bacteriorhodopsin n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NGJ1_9EURY
bopI; bacteriorhodopsin precursor (Squarebop I)
Bacteriorhodopsin {ECO:0000313|EMBL:ERG95938.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW2.;"
sw_8_scaffold_6187_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3305..3643
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N1D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG90143.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
small CPxCG-related zinc finger protein
sw_8_scaffold_6187_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3817..4179
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA02 RepID=R8ZJ33_PSEAI
Uncharacterized protein; TaxID=1315978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA02.;"
sw_8_scaffold_6187_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4426..5679
DNA (1254bp) protein (418aa)
IS1341-type transposase ISNph18 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ILV6_NATPD
IS1341-type transposase
IS1341-type transposase ISNph18 {ECO:0000313|EMBL:CAI50914.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_8_scaffold_6187_9
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5816..6010
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZMV3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY87386.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
Displaying 9 items

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