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sw_8_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_72_1
unknown

Not on your lists

2..382
DNA (381bp) protein (127aa)

This feature has no annotations

sw_8_scaffold_72_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

395..2383
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJ99_9EURY
PKD domain protein {ECO:0000313|EMBL:ERG94205.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW2.;"
hypothetical protein
sw_8_scaffold_72_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2863..3501)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QNU7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93600.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_8_scaffold_72_4
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3857..4069
DNA (213bp) protein (71aa)
Vng6396h n=1 Tax=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) RepID=Q9HHH5_HALSA
hypothetical protein
Vng6396h {ECO:0000313|EMBL:AAG21007.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strain ATCC 7009
sw_8_scaffold_72_5
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4416..4589
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA29206.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
sw_8_scaffold_72_6
unknown

Not on your lists

comp(4600..4815)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_8_scaffold_72_7
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4837..5070)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY97812.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
sw_8_scaffold_72_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5246..6085
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNT4_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35617.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_8_scaffold_72_9
unknown

Not on your lists

comp(6221..6421)
DNA (201bp) protein (67aa)

This feature has no annotations

sw_8_scaffold_72_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6482..8254)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXN3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38352.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_8_scaffold_72_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8247..9020)
DNA (774bp) protein (258aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NGW7_9EURY
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EMA56354.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
ABC-type multidrug transport system, ATPase component
sw_8_scaffold_72_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9333..10106)
DNA (774bp) protein (258aa)
Transposase n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRH3_HALBP
transposase
Transposase {ECO:0000313|EMBL:ADQ65649.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain ATC
sw_8_scaffold_72_13
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10127..10576)
DNA (450bp) protein (150aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PHD6_9EURY
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:EMA69333.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
transposase, IS605 OrfB family
sw_8_scaffold_72_14
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11618..13591)
DNA (1974bp) protein (658aa)
Kinetochore-Ndc80 complex, subunit Spc25 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1H8_HALTV
Kinetochore-Ndc80 complex, subunit Spc25
Kinetochore-Ndc80 complex, subunit Spc25 {ECO:0000313|EMBL:ADB63225.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
sw_8_scaffold_72_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13639..14262)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3R4_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37166.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_8_scaffold_72_16
unknown

Not on your lists

14502..14684
DNA (183bp) protein (61aa)

This feature has no annotations

sw_8_scaffold_72_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15137..15913)
DNA (777bp) protein (259aa)
Transcription regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZV1_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ27947.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
IclR family transcriptional regulator
sw_8_scaffold_72_18
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15967..17097)
DNA (1131bp) protein (377aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVI1_HALBP
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADQ68865.1}; Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY28707.1}; TaxID=469382 species="Archaea; Eur
sw_8_scaffold_72_19
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17151..19484)
DNA (2334bp) protein (778aa)
Alpha-glucosidase n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DCG5_9EURY
Alpha-glucosidase {ECO:0000313|EMBL:ELZ31859.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
alpha-glucosidase
sw_8_scaffold_72_20

Not on your lists

19562..20827
DNA (1266bp) protein (422aa)
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZP64_9ARCH
L-alanine-DL-glutamate epimerase related enzymes of enolase superfamily {ECO:0000313|EMBL:ESS04375.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
mandelate racemase/muconate lactonizing protein
sw_8_scaffold_72_21

Not on your lists

20866..21837
DNA (972bp) protein (324aa)
Lactate dehydrogenase related dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XFV0_9ARCH
Lactate dehydrogenase related dehydrogenase {ECO:0000313|EMBL:ESS06999.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
phosphoglycerate dehydrogenase-like oxidoreductase
sw_8_scaffold_72_22
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(21842..22708)
DNA (867bp) protein (289aa)
ABC-type sugar transport system, permease component n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KBM5_HALHC
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJF16827.1}; TaxID=1280514 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" sour
ABC-type sugar transport system, permease component
sw_8_scaffold_72_23
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22710..23681)
DNA (972bp) protein (324aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIL0_KOSOT
ABC transporter permease {ECO:0000313|EMBL:KHO60967.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoan
binding-protein-dependent transport systems inner membrane component
sw_8_scaffold_72_24
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24153..24473
DNA (321bp) protein (107aa)
Dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTT4_9EURY
UxaA family hydrolase {ECO:0000313|EMBL:ESE91429.1}; TaxID=1173948 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enter
SAF domain protein
sw_8_scaffold_72_25
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24475..25641
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI0003683DA1
Uncharacterized protein {ECO:0000313|EMBL:KJS18889.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
altronate dehydratase
sw_8_scaffold_72_26
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25638..26642
DNA (1005bp) protein (335aa)
(R)-2-hydroxyacid dehydrogenase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YGH3_9EURY
(R)-2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:GAD53366.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
(R)-2-hydroxyacid dehydrogenase
sw_8_scaffold_72_27
Thermosipho africanus, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

26716..27840
DNA (1125bp) protein (375aa)
Trehalose/maltose binding protein (Fragment) n=1 Tax=Thermosipho africanus H17ap60334 RepID=K2PJ88_9THEM
Trehalose/maltose binding protein {ECO:0000313|EMBL:EKF50279.1}; Flags: Fragment;; TaxID=1161912 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho
trehalose/maltose binding protein
sw_8_scaffold_72_28

Not on your lists

comp(28138..29040)
DNA (903bp) protein (301aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVZ9_9ARCH
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:ESS04376.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_8_scaffold_72_29
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

29484..30959
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TU69_9EURY
cofA; lactaldehyde dehydrogenase CofA
Lactaldehyde dehydrogenase CofA {ECO:0000313|EMBL:AGN16309.1}; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Met
sw_8_scaffold_72_30
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31047..32132)
DNA (1086bp) protein (362aa)
Xylose dehydrogenase (NAD/NADP) n=3 Tax=Haloferax RepID=M0FPT8_9EURY
Xylose dehydrogenase (NAD/NADP) {ECO:0000313|EMBL:ELZ70888.1}; TaxID=1227462 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-6
xylose dehydrogenase (NAD/NADP)
Displaying items 1-30 of 36 in total

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