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sw_8_scaffold_725

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_725_1
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..205
DNA (204bp) protein (68aa)
MarR family transcriptional regulator n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E3A2_9EURY
MarR family transcriptional regulator {ECO:0000313|EMBL:ELZ40824.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum califo
archaeal sugar-specific transcriptional regulator, TrmB family
sw_8_scaffold_725_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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308..631
DNA (324bp) protein (108aa)
IS1341-type transposase ISNph22 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISE8_NATPD
IS1341-type transposase
IS1341-type transposase ISNph22 {ECO:0000313|EMBL:CAI48939.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_8_scaffold_725_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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628..1524
DNA (897bp) protein (299aa)
IS1341-type transposase ISNph22 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISE8_NATPD
IS1341-type transposase
IS1341-type transposase ISNph22 {ECO:0000313|EMBL:CAI48939.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_8_scaffold_725_4
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1625..2038
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWQ4_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58895.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_8_scaffold_725_5
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2210..2440
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYN2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF99730.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_8_scaffold_725_6
unknown

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2479..2610
DNA (132bp) protein (44aa)

This feature has no annotations

sw_8_scaffold_725_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2886..4376)
DNA (1491bp) protein (497aa)
Multi antimicrobial extrusion family drug/sodium antiporter n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QMM0_9EURY
Multi antimicrobial extrusion family drug/sodium antiporter {ECO:0000313|EMBL:EFW94204.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;
matE1; multi antimicrobial extrusion family drug/sodium antiporter
sw_8_scaffold_725_8
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4432..5016)
DNA (585bp) protein (195aa)
TetR family transcriptional regulator n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J564_9EURY
TetR family transcriptional regulator {ECO:0000313|EMBL:EMA03129.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrifi
TetR family transcriptional regulator
sw_8_scaffold_725_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5374..5649)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEE6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58294.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_8_scaffold_725_10
unknown

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5930..6148
DNA (219bp) protein (73aa)

This feature has no annotations

sw_8_scaffold_725_11

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comp(6573..6971)
DNA (399bp) protein (133aa)
Putative dioxygenase of extradiol dioxygenase family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XE44_9ARCH
Putative dioxygenase of extradiol dioxygenase family {ECO:0000313|EMBL:ESS06264.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
glyoxalase
sw_8_scaffold_725_12

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7256..7576
DNA (321bp) protein (107aa)
Transposase, IS605 OrfB family, central region n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y5E3_9ARCH
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:ESS07931.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
transposase, IS605 OrfB family
sw_8_scaffold_725_13
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7622..7777
DNA (156bp) protein (52aa)
Transposase, IS605 OrfB family protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KLB4_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA20959.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ca
transposase, IS605 OrfB family, central region
sw_8_scaffold_725_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7774..8442)
DNA (669bp) protein (223aa)
Transposase IS200-family protein n=2 Tax=Halobacteriaceae RepID=C7NYP4_HALMD
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:ACV46705.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
sw_8_scaffold_725_15
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8495..8782
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AXR5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ02209.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
hypothetical protein
Displaying 15 items

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