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sw_8_scaffold_843

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_843_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(222..1112)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I307_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99644.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
sw_8_scaffold_843_2
unknown

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1120..1257
DNA (138bp) protein (46aa)

This feature has no annotations

sw_8_scaffold_843_3
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1379..2176)
DNA (798bp) protein (266aa)
Transcriptional regulator n=1 Tax=Brevibacillus sp. CF112 RepID=J2IG83_9BACL
Transcriptional regulator kdgR {ECO:0000313|EMBL:EMR06103.1}; TaxID=1235279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea.;" source="Bhargavaea cecembensis DSE10.;"
IclR family transcriptional regulator
sw_8_scaffold_843_4
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2527..2817)
DNA (291bp) protein (97aa)
Arylsulfatase A family protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3AMJ0_9SPHN
Arylsulfatase A family protein {ECO:0000313|EMBL:EJL33474.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
sw_8_scaffold_843_5
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(2836..4026)
DNA (1191bp) protein (397aa)
Hypothetical secreted protein n=1 Tax=uncultured planctomycete 3FN RepID=A9LGV6_9BACT
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein
sw_8_scaffold_843_6

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comp(4069..4557)
DNA (489bp) protein (163aa)
Cupin domain n=1 Tax=uncultured organism RepID=T1W9B8_9ZZZZ
Cupin domain {ECO:0000313|EMBL:AGU11276.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sw_8_scaffold_843_7
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4667..5431)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00035F6DC0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU02560.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
sw_8_scaffold_843_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5428..6114)
DNA (687bp) protein (229aa)
Glucose/sorbosone dehydrogenase-like protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QKY3_SPILD
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase-like protein {ECO:0000313|EMBL:ADB37222.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingu
sw_8_scaffold_843_9
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6111..7328)
DNA (1218bp) protein (406aa)
Blue (Type 1) copper domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ77_PEDHD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACU02559.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedob
sw_8_scaffold_843_10
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7355..10201)
DNA (2847bp) protein (949aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MPN8_SACVD
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:ACU96283.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora vir
sw_8_scaffold_843_11
CG_Arma_01, Armatimonadetes, Bacteria

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comp(10225..11460)
DNA (1236bp) protein (412aa)
Chloromuconate cycloisomerase n=1 Tax=uncultured planctomycete 3FN RepID=A9LGV7_9BACT
mandelate racemase/muconate lactonizing protein Tax=CG_Arma_01
mandelate racemase/muconate lactonizing protein
sw_8_scaffold_843_12

Not on your lists

comp(11855..12331)
DNA (477bp) protein (159aa)
Marine sediment metagenome DNA, contig: S01H4_L05641 {ECO:0000313|EMBL:GAG84470.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
sw_8_scaffold_843_13

Not on your lists

comp(12292..13254)
DNA (963bp) protein (321aa)
Arylsulfatase A family protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K1N4_9EURY
Marine sediment metagenome DNA, contig: S03H2_C04056 {ECO:0000313|EMBL:GAH18505.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
arylsulfatase A family protein
sw_8_scaffold_843_14
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13405..13659)
DNA (255bp) protein (85aa)
RagB/SusD domain-containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J1T8_CYCMS
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEL23944.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" sour
Displaying 14 items

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