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sw_8_scaffold_367_10

Organism: SW_8_UNK

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Location: comp(9514..13842)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit A'; EC=2.7.7.6;; Contains:; Mja rpoA1 intein; Mja rpol A' intein; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 999.99
  • Bit_score: 1049
  • Evalue 0.0
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 526.0
  • Bit_score: 932
  • Evalue 1.60e-268
DNA-directed RNA polymerase subunit A' n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RPOA1_METJA similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 999.99
  • Bit_score: 1049
  • Evalue 0.0

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Taxonomy

Methanocaldococcus jannaschii → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 4329
ATGAGTCAACGGGCACCAAAAGCGATCGGACGGCTCGAATTCGGGTTTATGGATCCCGAAGAGTATCGCGACATGAGCGCCACCAAGGTGATCACGGCCGACACCTACGACGACGACGGCTTCCCAATCGACATGGGGCTGATGGACCCGCGGCTGGGCGTGATCGACCCGGGGCTGGAGTGCAAGACCTGCGGCAAGCACTCCGGCTCCTGTAACGGCCACTTCGGCCACATCGAACTGGCAGCGCCGGTGATCCACGTCGGCCACAACAAGCTGATCCGCCGGCTGCTGCGCGGAACCTGCCGCGAGTGCTCCCGGCTCTGCCTGGCCGAGGACGAGAAGGCGGAGTTCCGGGAGCAACTGCGCCGGACCCGCGACCTGGGTCGGGATCTCAACGACGTGACGAAGGCCGCCATCCGGGCGGCCCGCAAGAAGGACCGCTGTCCCCACTGCGGCGAGAAACAGTTCGACATCCAGCACGAGAAGCCGACGACCTACTACGAGGTCCAGCAGGTGCTGGCCGCCGACTACCCCGGCCGCATCGCGGCCGCAATGGAGCCTGGCGAGGAGGACGACGAGCGGGTCACCCCGCCGGAGCTGGCCGAGGAGGCCGGCATCGACGCGGGCCGGGTCCAGGAAATCCTCTCGGGGGAGTTCCGGCCGCGAAAGGAGGACCGCGAGGCCATCGAGACGGCGCTGGACGTGGACCTGACCGAGGAGGACATGAACAAGCTGATGCCCTCGGACATCCGCGACTGGTTCGAGGACATCCCGGACGAGGACATCGCGGTCATCGGGATGGACGCCGACCGGTCGCGGCCCGAGTGGATGATCCTCACAGTGCTTCCGGTGCCGCCGGTCACCGCCCGGCCGTCGATCACGCTGGACAACGGCCAGCGCTCGGAGGACGACCTCACGCACAAGCTGGTGGACATCATCCGGATCAACCAGCGGTTCATGGAGAACCGCGAGGCCGGCGCGCCCCAGCTGATCATCGAGGACCTCTGGGAGCTGCTGCAGTACCACGTCACGACGTTCATGGACAACGAGATTTCGGGCACGCCGCCGGCACGGCACCGCTCCGGCCGGCCGCTAAAGACGCTCTCCCAGCGCCTGAAAGGCAAGGAAGGACGCTTCCGAGGGTCGCTGTCCGGCAAGCGGGTGAACTTCTCCGCCCGGACCGTGATCTCGCCGGACCCGACGCTGTCGCTGAACGAGGTTGGCGTGCCCAACCGGGTCGCGACGGAGATGACCCAGACGATGAACGTCAACGAGCGCAACCTCGAGAAGGCACGCCGGTACGTCAGCAACGGGCCGGAGGAGCACCCAGGCGCGAACTACGTCCGGCGCGAGGACGGCCGCCGGCTGAAGGTCACCGAGAAGAACTGCGAGGAACTCGCAGAGAAGGTCAAGCCCGGCTGGGAGGTCTCCCGGCACCTCGTCGACGGCGACATCGTGATCTTCAACCGCCAGCCGTCGCTCCACCGGATGTCCATCATGGCCCACGAGGTGGTCGTGATGCCGTACAAGACGTTCCGGCTGAACACGACGGTGTGTGTCGCCGGCGATACCGAGGTCGACTGTGGCGGCTACGTCCGGCCGATCGAGGACATTGAAGACGACTGGCGCGAAGAGTCCGTCACGACGTACGATCCTGACGACCGCGAGATTAGATCGACCGGGCTACAGGACTTCTGGTCGCTCCGTCCGGAGGAGTACGGTGCGACGGTCCACGAGATCGAGACCGAGTTCGGTTCGGTCGTCGCGACCTCGGATCACCCCTTCGAGACGCCCGACGGGCCGGTACCCGTCGAGGACCTGGAGGTCGGTGACACGCTGCTCCGGCGACCGATCGACCTTCCCGAGTTCGATCCGAGTGCCGACGAACAGTTCGTTATCACCGAGGAGGACATCCGCGAGGCAGCACCCGAAGCGACGTACATCGGACACGCGATGCGAACGCTCGACGATCTCGTATCCTTCGACGCGCACTCACGCGAGGGCGTCGCGGTTGCTCGTCTTGCCGGTCACCTGTTCGGTGACGGGACACTGGATCTGAGTGGGCAGACCGGACGGTTGTTCTTCAGAGCAAGCCAGGACGATCTCGGTAGCATCCGGGAGGATCTCGAACTGCTCGGGTTCGAACCCGAAGATCCGGTGCTGAAGCACAATACTGCGGAACTCGTCGCAGCCGACGGCGGAACCACGACCGTGAGCGGGAGCGGCTGGTCGATGAAGATCGGAAGCAAACCGTTGGCGTCGTTCATGGCTGCTGTCGGCGTCCCGCCAGGTGACAAGGTCGAGTCGGATCACACCGTTCCAGACTGGATCCTGAATGGACCGAAAGCCGTCAAGCGAGCGTTCCTGAGTGCGTACTTCGGTGCGGAGTTACGTACTCCCGTGTACCGTGGATATAAGCGGTTCCGACAACCGGAGTTTAAACTCTCACGAACCGAGGACGCACTTGAGGCTGGTAAGCGATTCGTCGAGGAAATCGACGAACTGCTCCAAGAATTCGGATCCGGCGTCTCTAATATCCGGGTCACTCCGGGTAACCAGCGCGCCGATGGATCGATCTCACAGCAGATCACCGCAGGCTTGTACTCCGGCCAAGAAGCTCTTCGATCACTATACGGTAAGATCGGATACACGTATAATGGCGAGGCCGACGGCCAGGCTCGTCTCGCATACGCGTACCTCTCGGAAAAAATCGAGCACGGCGGAATAGATGAGTACGAGCAGTGGAAGGACAGACGTGTCTACAATAGTTCAGAAGGAGTTATATTAGATCAGGTAATATCAATATCGTATAGTGAGAATGAGAAAACGTACGATATAACCACTTCAGACCCATCTCACAAGTTCGTATCCAACTGTCTGATATGCAATAATTGCCCGCCGTATAACGCCGACTTCGACGGCGACGAGATGAACATGCACGCCCTCCAGAACGAGGAGGCCCGCGCGGAGGCACGGGTCCTGATGCGCGTCCAGGAGCAGATGCTGTCGCCGCGGTTCGGCGAGAACATCCTGGGCGCCATCCAGGACCACATCACCGGGACGTACCTCCTGACGAACACGAACCCCCGGTTCAACGAGACGCAGGCCCTGGACCTGCTGCGCGCCACCCGTATCGACGAACTGCCCGAACCCGACGGCGTCCGCACGAGCGGGGCGAGGGCGGGCTCGTCAGACGCCACAGCGACCGACGGCGAGGAGGACGGCACGGCCTACTGGACCGGCCGGACAATCTTCTCGGAGCTGTTGCCGGAGGGGCTGGACCTGGAGTTCACGTCCTCGGCCGGCGACACGGTGGTCATCGAGGACGGCCAGCTGATCGAGGGGACGATCGACGAGGACGCGGCCGGGGCTTTCGGCGGCGAAGTCGTCGACTCGATCGCCAAGCAGTACTCCCGGACGCGCGGCCGAATCTTCATCAACGAAGTGTCCTCGCTGGCCGTCCGGACGATGATGCACTTCGGGTTCTCGATCAGCATCGACGACGAGTCGATCCCGCCGGAGGCACAGGCGCAGGTCGACGAGGCCATCGAGGAGGCCAACGAGCGCGTCGAGGAGCTGATCGACGCCTACGAGGCGGGCGACCTGGAGTCGCTGCCGGGCCGGACGATCGACGAGACGCTGGAGATGAAGATCATGCAGACGCTCGGCCAGGCGCGTGACAGCGCCGGCGACATCGCAGAGGACCACTTCGCCGACGACAACCCCGCCGTCATCATGGCCGAGTCCGGCGCGCGTGGCTCGATGCTGAACCTCACCCAGATGGCCGGCTGCGTCGGCCAGCAGGCGGTCAGGGGCGAGCGGATCAACCGCGGCTACGAGAACCGGACGCTGTCGCATTACGCCGAGGGCGACCTCTCCTCGGAGGCCCACGGGTTCGTGAAACACTCCTATCGCGAGGGGCTCGAACCCAAGGAGTTCTTCTTCCACGCGATGGGCGGCCGCGAGGGGCTGGTCGACACGGCAGTGCGGACCTCCAAGTCCGGCTACCTGCAGCGCCGGCTGATCAACGCCCTCTCCGAACTCGAAACCCAGTACGACGGCACCGTGCGGGACACCTCCGACACCATCGTGCAGTTCGAGTTCGGCGAGGACGGCACCTCGCCGGTCGAGGTCTCCAGTTCCCAGGAGGGGCCGGCGGTCGACGTCGAGAACATCGCCGACCGCATCCTCGAAGAAGAGTTCGACGACGAGAGCGAGAAAGAGCGGTTCATGGGTGACCGGCCCGAACCGACGAATCTCTCCGAGCACACGGACGAATCGTGGCTCGAAAAGACGACTGCCCAGAGCGACGCCAGGAGTGATGACTGA
PROTEIN sequence
Length: 1443
MSQRAPKAIGRLEFGFMDPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGLECKTCGKHSGSCNGHFGHIELAAPVIHVGHNKLIRRLLRGTCRECSRLCLAEDEKAEFREQLRRTRDLGRDLNDVTKAAIRAARKKDRCPHCGEKQFDIQHEKPTTYYEVQQVLAADYPGRIAAAMEPGEEDDERVTPPELAEEAGIDAGRVQEILSGEFRPRKEDREAIETALDVDLTEEDMNKLMPSDIRDWFEDIPDEDIAVIGMDADRSRPEWMILTVLPVPPVTARPSITLDNGQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPNRVATEMTQTMNVNERNLEKARRYVSNGPEEHPGANYVRREDGRRLKVTEKNCEELAEKVKPGWEVSRHLVDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCVAGDTEVDCGGYVRPIEDIEDDWREESVTTYDPDDREIRSTGLQDFWSLRPEEYGATVHEIETEFGSVVATSDHPFETPDGPVPVEDLEVGDTLLRRPIDLPEFDPSADEQFVITEEDIREAAPEATYIGHAMRTLDDLVSFDAHSREGVAVARLAGHLFGDGTLDLSGQTGRLFFRASQDDLGSIREDLELLGFEPEDPVLKHNTAELVAADGGTTTVSGSGWSMKIGSKPLASFMAAVGVPPGDKVESDHTVPDWILNGPKAVKRAFLSAYFGAELRTPVYRGYKRFRQPEFKLSRTEDALEAGKRFVEEIDELLQEFGSGVSNIRVTPGNQRADGSISQQITAGLYSGQEALRSLYGKIGYTYNGEADGQARLAYAYLSEKIEHGGIDEYEQWKDRRVYNSSEGVILDQVISISYSENEKTYDITTSDPSHKFVSNCLICNNCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQMLSPRFGENILGAIQDHITGTYLLTNTNPRFNETQALDLLRATRIDELPEPDGVRTSGARAGSSDATATDGEEDGTAYWTGRTIFSELLPEGLDLEFTSSAGDTVVIEDGQLIEGTIDEDAAGAFGGEVVDSIAKQYSRTRGRIFINEVSSLAVRTMMHFGFSISIDDESIPPEAQAQVDEAIEEANERVEELIDAYEAGDLESLPGRTIDETLEMKIMQTLGQARDSAGDIAEDHFADDNPAVIMAESGARGSMLNLTQMAGCVGQQAVRGERINRGYENRTLSHYAEGDLSSEAHGFVKHSYREGLEPKEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELETQYDGTVRDTSDTIVQFEFGEDGTSPVEVSSSQEGPAVDVENIADRILEEEFDDESEKERFMGDRPEPTNLSEHTDESWLEKTTAQSDARSDD*