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sw_8_scaffold_367

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_367_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..184)
DNA (183bp) protein (61aa)
Polyketide cyclase/dehydrase family protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L595_HALJP
polyketide cyclase
Polyketide cyclase {ECO:0000313|EMBL:AHB65003.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_8_scaffold_367_2
Strigamia maritima, Strigamia, Geophilomorpha, Pleurostigmophora, Arthropoda, Metazoa

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comp(334..1440)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Strigamia maritima RepID=T1JFV4_STRMM
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SMAR012719-PA}; TaxID=126957 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda; Pleurostigmophora; Geophilomorpha; Linotaenii
hypothetical protein
sw_8_scaffold_367_3
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1535..2281)
DNA (747bp) protein (249aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1227482 species="Archaea; Euryarchaeota; H
Aspartate/glutamate/uridylate kinase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NH31_9EURY
aspartate/glutamate/uridylate kinase
sw_8_scaffold_367_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2283..3266)
DNA (984bp) protein (328aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=51
Mevalonate kinase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTM3_HALUD
mevalonate kinase
sw_8_scaffold_367_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3606..4025
DNA (420bp) protein (140aa)
mmcB; methylmalonyl-CoA mutase subunit B (cobalamin-binding subunit) (EC:5.4.99.2)
Methylmalonyl-CoA mutase subunit B (Cobalamin-binding subunit) {ECO:0000313|EMBL:CCQ36194.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CCQ36194.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Ha
Methylmalonyl-CoA mutase subunit B (Cobalamin-binding subunit) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ17_NATM8
sw_8_scaffold_367_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4030..5043
DNA (1014bp) protein (338aa)
ArgK-type transport ATPase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQZ7_NATPD
argK; transport ATPase, component for LAO/AO transport systems
YgfD family GTPase {ECO:0000313|EMBL:CAI49447.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_8_scaffold_367_7
unknown

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comp(5046..5243)
DNA (198bp) protein (66aa)

This feature has no annotations

sw_8_scaffold_367_8
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6415..6840)
DNA (426bp) protein (142aa)
Transcription elongation factor NusA n=3 Tax=Haloarcula RepID=V5TRC4_HALHI
transcription elongation factor NusA
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source=
sw_8_scaffold_367_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6842..9514)
DNA (2673bp) protein (891aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:CCQ32814.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCQ32814.1};; DNA-directed RNA polymerase subunit A'' protein {ECO:0000313|EMBL:ERJ07195.1}; EC=2.7.7.
DNA-directed RNA polymerase subunit A n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP17_9EURY
sw_8_scaffold_367_10
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(9514..13842)
DNA (4329bp) protein (1443aa)
DNA-directed RNA polymerase subunit A'; EC=2.7.7.6;; Contains:; Mja rpoA1 intein; Mja rpol A' intein; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A' n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=RPOA1_METJA
sw_8_scaffold_367_11
Halovenus aranensis, Halovenus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13839..15665)
DNA (1827bp) protein (609aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=890420 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B n=3 Tax=Haloarcula hispanica RepID=V5TQ02_HALHI
sw_8_scaffold_367_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15667..17229)
DNA (1563bp) protein (521aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:ELZ22437.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ22437.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJ99_9EURY
DNA-directed RNA polymerase subunit beta''
sw_8_scaffold_367_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17229..17456)
DNA (228bp) protein (76aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
DNA-directed RNA polymerase subunit H n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WAB1_9EURY
sw_8_scaffold_367_trna_1
unknown

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17697..17769
DNA (73bp)
transferRNA
Displaying 14 items

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