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SW_8_UNK

In projects: SW_8

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 17.32 Longest contig: 151.13 Kbp Bin length: 41.32 Mbp GC content: 58.51 %
Contigs count: 16401 Features count: 53796 rRNAs count: 12 tRNAs count: 452

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 48 / 51 MC: 40 ASCG 38 / 38 MC: 38
Displaying items 151-200 of 16401 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_8_scaffold_1467
Class: Halobacteria (82.35%)
17 14703 bp 58.27 14.29 78.62
sw_8_scaffold_3381
Phylum: Bacteroidetes (50%)
14 14673 bp 62.60 12.39 72.91
sw_8_scaffold_369 14 14653 bp 54.66 9.40 81.83
sw_8_scaffold_1136
Class: Halobacteria (61.9%)
21 14651 bp 57.28 17.56 84.47
sw_8_scaffold_1212 14 14621 bp 53.16 9.40 56.06
sw_8_scaffold_2828
Phylum: Bacteroidetes (50%)
16 14585 bp 63.63 11.11 76.52
sw_8_scaffold_1162
Phylum: Bacteroidetes (55.56%)
9 14496 bp 65.01 52.20 83.46
sw_8_scaffold_712
Order: Halobacteriales (57.89%)
19 14488 bp 65.45 29.61 87.71
sw_8_scaffold_1949
Domain: Bacteria (81.82%)
11 14487 bp 56.84 10.11 80.80
sw_8_scaffold_934 17 14394 bp 52.76 9.09 76.20
sw_8_scaffold_856 17 14387 bp 54.93 8.94 86.22
sw_8_scaffold_1372 20 14341 bp 53.73 9.16 76.75
sw_8_scaffold_480 7 14328 bp 54.99 9.32 89.55
sw_8_scaffold_711 10 14275 bp 54.67 9.23 67.31
sw_8_scaffold_300
Class: Oscillatoriophycideae (57.14%)
7 14268 bp 47.04 14.52 95.29
sw_8_scaffold_1300 22 14257 bp 36.04 6.91 78.02
sw_8_scaffold_1394 19 14134 bp 40.10 6.95 73.49
sw_8_scaffold_374
Class: Halobacteria (92.31%)
13 14114 bp 55.33 13.58 90.38
sw_8_scaffold_2302
Class: Halobacteria (53.85%)
13 14105 bp 59.23 12.37 70.87
sw_8_scaffold_788 14 14090 bp 54.68 8.64 67.56
sw_8_scaffold_272 3 14034 bp 53.26 9.09 99.23
sw_8_scaffold_477 21 13978 bp 55.47 8.87 71.08
sw_8_scaffold_731
Order: Halobacteriales (50%)
12 13864 bp 64.90 16.89 89.00
sw_8_scaffold_345 22 13851 bp 54.02 9.49 72.71
sw_8_scaffold_756
Domain: Bacteria (62.5%)
16 13850 bp 62.09 19.73 89.44
sw_8_scaffold_2127 17 13800 bp 55.78 8.78 70.37
sw_8_scaffold_385
Domain: Bacteria (77.78%)
9 13795 bp 64.37 30.83 83.44
sw_8_scaffold_278 14 13782 bp 51.63 9.92 84.26
sw_8_scaffold_1024 14 13768 bp 54.69 8.66 67.53
sw_8_scaffold_990 11 13705 bp 53.18 9.17 75.78
sw_8_scaffold_843
Domain: Bacteria (71.43%)
14 13659 bp 60.93 11.04 89.66
sw_8_scaffold_1197 13 13620 bp 56.27 9.39 72.82
sw_8_scaffold_397 15 13562 bp 55.64 9.69 76.27
sw_8_scaffold_1164 16 13554 bp 53.14 8.79 62.04
sw_8_scaffold_1216 13 13543 bp 54.97 10.75 83.67
sw_8_scaffold_717 16 13532 bp 55.76 8.56 67.44
sw_8_scaffold_1233
Class: Halobacteria (58.82%)
17 13508 bp 60.98 22.01 79.26
sw_8_scaffold_926 16 13504 bp 39.85 6.61 88.53
sw_8_scaffold_771
Order: Bacteroidetes Order II. Incertae sedis (50%)
12 13466 bp 66.00 57.64 85.01
sw_8_scaffold_478 12 13459 bp 53.52 9.41 73.62
sw_8_scaffold_288
Order: Halobacteriales (52.94%)
17 13446 bp 60.21 23.94 76.95
sw_8_scaffold_289 24 13430 bp 60.45 11.55 82.25
sw_8_scaffold_290
Domain: Bacteria (58.82%)
17 13404 bp 34.52 20.78 93.06
sw_8_scaffold_829 7 13372 bp 51.48 8.79 83.64
sw_8_scaffold_2432 12 13356 bp 55.59 8.99 81.06
sw_8_scaffold_1224 19 13335 bp 53.55 8.80 79.82
sw_8_scaffold_1601 21 13239 bp 54.51 8.71 76.75
sw_8_scaffold_562
Order: Bacteroidetes Order II. Incertae sedis (50%)
10 13226 bp 62.50 46.17 92.68
sw_8_scaffold_4964
Class: Halobacteria (76.92%)
13 13200 bp 62.01 14.30 65.55
sw_8_scaffold_1794 19 13197 bp 55.03 8.99 80.22
Displaying items 151-200 of 16401 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.