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sw_8_scaffold_2014

Search features with annotation key words

Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_2014_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(254..586)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKG3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ07034.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_8_scaffold_2014_2
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(583..1539)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HGX8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ82982.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
sw_8_scaffold_2014_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1642..1944
DNA (303bp) protein (101aa)
50S ribosomal protein L44e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL44E_NATPD
rpl44e; 50S ribosomal protein L44e
50S ribosomal protein L44e; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 35678 / DSM 2160)
sw_8_scaffold_2014_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1947..2120
DNA (174bp) protein (58aa)
30S ribosomal protein S27e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y229_NATM8
rps27e; 30S ribosomal protein S27e
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_8_scaffold_2014_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2426..3283
DNA (858bp) protein (286aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISI6_NATPD
tif2a; translation initiation factor IF-2 subunit alpha
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=348780 species="Arch
sw_8_scaffold_2014_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3529..4278
DNA (750bp) protein (250aa)
PAC2 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISI3_NATPD
hypothetical protein
PAC2 family protein {ECO:0000313|EMBL:CAI48903.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_8_scaffold_2014_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4301..4966
DNA (666bp) protein (222aa)
Chaperone protein DnaJ n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRQ7_9EURY
Chaperone protein DnaJ {ECO:0000313|EMBL:ELZ25067.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
heat shock protein DnaJ domain-containing protein
sw_8_scaffold_2014_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4963..5175
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQS7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36522.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_8_scaffold_2014_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5227..6447)
DNA (1221bp) protein (407aa)
DNA mismatch repair protein MutS n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKI9_NATM8
mutS5b; DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000313|EMBL:CCQ35979.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mool
sw_8_scaffold_2014_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6468..6935)
DNA (468bp) protein (156aa)
DNA mismatch repair protein MutS n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKI9_NATM8
mutS5b; DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000313|EMBL:CCQ35979.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mool
sw_8_scaffold_2014_11
unknown

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7039..8415
DNA (1377bp) protein (459aa)

This feature has no annotations

sw_8_scaffold_2014_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8467..8970)
DNA (504bp) protein (168aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8M8_HALJB
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADJ14213.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalka
Displaying 12 items

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