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sw_8_scaffold_107

Search features with annotation key words

Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_107_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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159..692
DNA (534bp) protein (178aa)
Dephospho-CoA kinase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5A3_HALJB
dephospho-CoA kinase
Dephospho-CoA kinase {ECO:0000313|EMBL:ADJ13684.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (
sw_8_scaffold_107_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

689..1102
DNA (414bp) protein (138aa)
Dephospho-CoA kinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VZ89_9EURY
dephospho-CoA kinase
Dephospho-CoA kinase {ECO:0000313|EMBL:AGN01571.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_8_scaffold_107_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1148..2182)
DNA (1035bp) protein (345aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF76_9EURY
Sulfite oxidase-like oxidoreductase {ECO:0000313|EMBL:EMA55345.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
sulfite oxidase
sw_8_scaffold_107_4
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2274..3356
DNA (1083bp) protein (361aa)
degP; periplasmic serine proteinase (EC:3.4.21.-) id=24628447 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
degP; probable periplasmic serine protease (EC:3.4.21.-)
Serine proteinase {ECO:0000313|EMBL:ERG91195.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.;"
sw_8_scaffold_107_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3400..4323
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8G6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53868.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
iron ABC transporter substrate-binding protein
sw_8_scaffold_107_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4328..4729
DNA (402bp) protein (134aa)
JAMM domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUQ8_NATPD
hypothetical protein
Metalloprotease JAMM1, desampylating {ECO:0000313|EMBL:CAI48122.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_8_scaffold_107_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4762..5046
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KBI1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA17210.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_8_scaffold_107_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5043..5855)
DNA (813bp) protein (271aa)
SAMP-activating enzyme E1 {ECO:0000313|EMBL:CAI48117.1}; EC=2.7.7.- {ECO:0000313|EMBL:CAI48117.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
SAMP-activating enzyme E1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUR3_NATPD
moeB; molybdenum cofactor biosynthesis protein MoeB
sw_8_scaffold_107_9
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6052..6780
DNA (729bp) protein (243aa)
Bacteriorhodopsin n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WGU1_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ELY48735.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
bacteriorhodopsin
sw_8_scaffold_107_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6832..7599
DNA (768bp) protein (256aa)
crtY; lycopene beta-cyclase (EC:5.5.1.19)
Lycopene beta-cyclase {ECO:0000313|EMBL:CCQ35502.1}; EC=5.5.1.19 {ECO:0000313|EMBL:CCQ35502.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
Lycopene beta-cyclase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNK6_NATM8
sw_8_scaffold_107_11
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7596..8642
DNA (1047bp) protein (349aa)
Brp-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LNF4_HALJP
beta-carotene 15,15'-monooxygenase
Beta-carotene 15,15'-monooxygenase {ECO:0000313|EMBL:AJF25183.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. C
sw_8_scaffold_107_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8644..9045)
DNA (402bp) protein (134aa)
msrB; peptide methionine sulfoxide reductase MsrB (R-form specific) (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A3Y0_9EURY
Peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:GAD52324.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiph
sw_8_scaffold_107_13
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9418..9591
DNA (174bp) protein (58aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=G0HWW7_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM57850.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_8_scaffold_107_14
unknown

Not on your lists

9624..9935
DNA (312bp) protein (104aa)

This feature has no annotations

sw_8_scaffold_107_15
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9960..10580
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DXE1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ39458.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_107_16
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10677..10961)
DNA (285bp) protein (95aa)
Translation initiation factor 1A n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4X2_HALJB
translation initiation factor aIF-1A
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
sw_8_scaffold_107_trna_2
unknown

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comp(11091..11165)
DNA (75bp)
transferRNA
sw_8_scaffold_107_trna_1
unknown

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comp(11226..11298)
DNA (73bp)
transferRNA
sw_8_scaffold_107_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


11614..12972
DNA (1359bp) protein (453aa)
cca; tRNA CCA-pyrophosphorylase (EC:2.7.7.25 2.7.7.21)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUD0_NATPD
sw_8_scaffold_107_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12973..13977)
DNA (1005bp) protein (335aa)
HdaI-type histone deacetylase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKB2_NATM8
hda1; HdaI-type histone deacetylase
HdaI-type histone deacetylase {ECO:0000313|EMBL:CCQ35579.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_8_scaffold_107_19
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13974..14549)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P3M2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG88102.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_8_scaffold_107_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14583..15023)
DNA (441bp) protein (147aa)
Archaeal histone n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUD2_NATPD
hstA; histone
Archaeal histone {ECO:0000313|EMBL:CAI48249.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain AT
sw_8_scaffold_107_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15362..15901)
DNA (540bp) protein (180aa)
UPF0218 protein Hmuk_0726 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZU9_HALMD
hypothetical protein
UPF0218 protein Hmuk_0726 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_8_scaffold_107_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15901..16098)
DNA (198bp) protein (66aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMM8_NATPD
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomo
sw_8_scaffold_107_23
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16098..16679)
DNA (582bp) protein (194aa)
DNA-directed RNA polymerase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUL7_HALUD
DNA-directed RNA polymerase subunit E'
DNA-directed RNA polymerase {ECO:0000313|EMBL:ACV12374.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (
sw_8_scaffold_107_24
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16679..17047)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJW8_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09427.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
rpo operon protein
sw_8_scaffold_107_25
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(17044..18255)
DNA (1212bp) protein (404aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DF34_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227487 species="Arc
tif2g; translation initiation factor aIF-2 gamma subunit
sw_8_scaffold_107_26
unknown

Not on your lists

comp(18252..18350)
DNA (99bp) protein (33aa)

This feature has no annotations

sw_8_scaffold_107_27
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18712..19638
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93943.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_8_scaffold_107_28
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19715..19951
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V4E9_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45603.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
Displaying items 1-30 of 61 in total

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