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sw_8_scaffold_1215

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1215_1
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..300)
DNA (300bp) protein (100aa)
Transposase, IS605 OrfB family protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WCB4_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELY45958.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum t
ntp; transposase
sw_8_scaffold_1215_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

607..2751
DNA (2145bp) protein (715aa)
Elongation factor 2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU18_NATM8
tef2; translation elongation factor aEF-2
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobac
sw_8_scaffold_1215_3
unknown

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comp(2802..2918)
DNA (117bp) protein (39aa)

This feature has no annotations

sw_8_scaffold_1215_4
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3067..3576
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5UZT0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV47223.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_8_scaffold_1215_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3585..4520
DNA (936bp) protein (312aa)
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:CCQ37944.1}; EC=1.1.1.3 {ECO:0000313|EMBL:CCQ37944.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Homoserine dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTW8_NATM8
sw_8_scaffold_1215_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4647..5861
DNA (1215bp) protein (405aa)
Elongation factor 1-alpha n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLL7_NATM8
tef1a; translation elongation factor aEF-1 alpha subunit
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
sw_8_scaffold_1215_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5862..6170
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS10_NATPD
rps10p; 30S ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_8_scaffold_1215_trna_1
unknown

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6257..6328
DNA (72bp)
transferRNA
sw_8_scaffold_1215_8
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6493..6945
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PD65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66785.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_8_scaffold_1215_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6917..7474)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45503.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_8_scaffold_1215_10
unknown

Not on your lists

7475..7996
DNA (522bp) protein (174aa)

This feature has no annotations

sw_8_scaffold_1215_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7993..9117)
DNA (1125bp) protein (375aa)
Antimicrobial peptides ABC transporter permease n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HB40_9EURY
Antimicrobial peptides ABC transporter permease {ECO:0000313|EMBL:ESP87268.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" s
hypothetical protein
sw_8_scaffold_1215_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9114..9842)
DNA (729bp) protein (243aa)
Antimicrobial peptide ABC transporter ATPase n=1 Tax=Halogranum salarium B-1 RepID=J3EY68_9EURY
Antimicrobial peptide ABC transporter ATPase {ECO:0000313|EMBL:EJN60207.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-
antimicrobial peptide ABC transporter ATPase
sw_8_scaffold_1215_13
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9839..11305)
DNA (1467bp) protein (489aa)
NPCBM-associated, NEW3 domain of alpha-galactosidase n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1N740_9EURY
NPCBM-associated, NEW3 domain of alpha-galactosidase {ECO:0000313|EMBL:ERG98844.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source=
hypothetical protein
sw_8_scaffold_1215_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11725..14103
DNA (2379bp) protein (793aa)
DNA repair helicase Rad3 {ECO:0000313|EMBL:CCQ37987.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CCQ37987.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
rad3b; DNA repair helicase Rad3 (EC:3.6.4.12)
DNA repair helicase Rad3 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTW6_NATM8
sw_8_scaffold_1215_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14131..15249)
DNA (1119bp) protein (373aa)
ORC1-type DNA replication protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLP0_NATM8
orc2; Orc1-type DNA replication protein
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_8_scaffold_1215_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15633..17627)
DNA (1995bp) protein (665aa)
DNA-binding protein MutS2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITZ9_NATPD
mutS_3; DNA mismatch repair protein MutS-like protein
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_8_scaffold_1215_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17694..18560)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGQ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ33902.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_8_scaffold_1215_18
unknown

Not on your lists

18618..18749
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 19 items

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