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sw_8_scaffold_235

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_235_1
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

250..1647
DNA (1398bp) protein (466aa)
Deoxyribodipyrimidine photo-lyase type i n=1 Tax=Halogranum salarium B-1 RepID=J3JF14_9EURY
Deoxyribodipyrimidine photo-lyase type i {ECO:0000313|EMBL:EJN58859.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
deoxyribodipyrimidine photo-lyase type i
sw_8_scaffold_235_2
unknown

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1678..2190
DNA (513bp) protein (171aa)

This feature has no annotations

sw_8_scaffold_235_3
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2289..2900
DNA (612bp) protein (204aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;
Superoxide dismutase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JLZ0_NATP1
superoxide dismutase
sw_8_scaffold_235_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2995..3285
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRT8_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV13043.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_8_scaffold_235_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3282..4127
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KX50_HALAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA24325.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
sw_8_scaffold_235_6
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4138..4746)
DNA (609bp) protein (203aa)
Beta-lactamase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M1I2_9EURY
Beta-lactamase {ECO:0000313|EMBL:EMA39521.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10879.;"
Zn-dependent hydrolase, glyoxylase
sw_8_scaffold_235_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4832..5815
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSA8_NATM8
hypothetical protein
DUF1119 family protein {ECO:0000313|EMBL:CCQ37238.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
sw_8_scaffold_235_8
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5816..6808)
DNA (993bp) protein (331aa)
ocd1; ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=2 Tax=Haloferax RepID=M0H6I2_HALL2
Ornithine cyclodeaminase {ECO:0000313|EMBL:ELZ78709.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lucentense (strain DS
sw_8_scaffold_235_9
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6962..7177)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0L1D2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA27356.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_8_scaffold_235_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7308..7712)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6B4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41241.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_8_scaffold_235_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7737..8318)
DNA (582bp) protein (194aa)
Methyl transferase-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYC3_9EURY
Methyl transferase-like protein {ECO:0000313|EMBL:ELZ27432.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
methyltransferase type 11
sw_8_scaffold_235_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8376..8924
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5X3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53281.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
GCN5-like N-acetyltransferase
sw_8_scaffold_235_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8975..9856
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W971_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02443.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_8_scaffold_235_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9908..10891
DNA (984bp) protein (328aa)
Flap endonuclease 1 {ECO:0000255|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000255|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=FEN_NATPD
fen; flap endonuclease-1
sw_8_scaffold_235_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10945..11175
DNA (231bp) protein (77aa)
BolA family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPH0_NATPD
bolA; morphology/transcription regulator BolA family protein
BolA family protein {ECO:0000313|EMBL:CAI49981.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_8_scaffold_235_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11302..12354)
DNA (1053bp) protein (351aa)
Transcriptional regulator, TrmB n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQA9_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EFW93173.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
trmB1; sugar-specific transcriptional regulator TrmB
sw_8_scaffold_235_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12404..13036)
DNA (633bp) protein (211aa)
PyrE-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY14_9EURY
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
pyrE2; homolog to orotate phosphoribosyltransferase
sw_8_scaffold_235_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13033..14091)
DNA (1059bp) protein (353aa)
glucose 1-dehydrogenase (EC:1.1.1.47)
Glucose 1-dehydrogenase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY13_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EFW90479.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladap
sw_8_scaffold_235_19
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14185..15432
DNA (1248bp) protein (416aa)
Haloacid dehalogenase domain protein hydrolase type 3 n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CEZ6_9EURY
Haloacid dehalogenase domain protein hydrolase type 3 {ECO:0000313|EMBL:ELZ20439.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="
hypothetical protein
sw_8_scaffold_235_20
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15741..16169)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLP3_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA32945.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_8_scaffold_235_21
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16316..16624
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GJR1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ71069.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
hypothetical protein
sw_8_scaffold_235_22
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16656..17375
DNA (720bp) protein (240aa)
Alpha/beta hydrolase fold protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KW63_HALAR
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EMA24464.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argent
hypothetical protein
sw_8_scaffold_235_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17375..17539
DNA (165bp) protein (55aa)
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELZ20650.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carls
sw_8_scaffold_235_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17589..17966)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20646.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
Displaying 24 items

View Taxonomy