ggKbase home page

sw_8_scaffold_249

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_249_1
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(250..447)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IHN2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR49882.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_8_scaffold_249_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

549..1634
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KM41_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA21978.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
sw_8_scaffold_249_3
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1666..2850
DNA (1185bp) protein (395aa)
Translation-associated GTPase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KJ64_9EURY
Translation-associated GTPase {ECO:0000313|EMBL:EMA21402.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytic
ychF; translation-associated GTPase
sw_8_scaffold_249_4
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2889..4043)
DNA (1155bp) protein (385aa)
Lycopene cyclase domain protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PCB4_9EURY
Lycopene cyclase domain protein {ECO:0000313|EMBL:EMA67802.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense J
lycopene cyclase domain
sw_8_scaffold_249_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4396..4656)
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:AHB68246.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_8_scaffold_249_6
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4735..5850)
DNA (1116bp) protein (372aa)
aspB2; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=2 Tax=Halarchaeum acidiphilum RepID=U2YDP7_9EURY
Aspartate aminotransferase {ECO:0000313|EMBL:GAD51801.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sw_8_scaffold_249_7
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6073..7110
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. J07HR59 RepID=U1NIW8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH03470.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
ssuA; putative sulfonate ABC transporter periplasmic substrate-binding protein
sw_8_scaffold_249_8
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7112..7900
DNA (789bp) protein (263aa)
ssuC; ABC-type transport system permease protein (probable substrate nitrate/sulfonate/bicarbonate) id=24635633 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:ERH03471.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; H
ssuC; ABC-type transport system permease protein (probable substrate nitrate/sulfonate/bicarbonate)
sw_8_scaffold_249_9

Not on your lists

7897..8658
DNA (762bp) protein (254aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=2 Tax=Archaea RepID=U1QDU7_9EURY
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:ESS12404.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ssuB; ABC-type transport system ATP-binding protein (probable substrate nitrate/sulfonate/bicarbonate)
sw_8_scaffold_249_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8685..8843)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DIK8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34532.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_8_scaffold_249_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9164..9388
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUA1_NATPD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAI48280.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_8_scaffold_249_12
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9423..9845
DNA (423bp) protein (141aa)
Polyketide cyclase/dehydrase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYF5_HALVA
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:EMA01892.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis
hypothetical protein
sw_8_scaffold_249_13
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10057..11085)
DNA (1029bp) protein (343aa)
glucose-fructose oxidoreductase (EC:1.1.99.28)
Glucose-fructose oxidoreductase {ECO:0000313|EMBL:AEH36491.1}; EC=1.1.99.28 {ECO:0000313|EMBL:AEH36491.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Hal
Glucose-fructose oxidoreductase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D7L2_HALXS
sw_8_scaffold_249_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11122..12156)
DNA (1035bp) protein (345aa)
Transcription regulator (Homolog to phosphate uptake regulator) n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISV1_NATPD
phoU_5; transport system regulatory protein ( substrate phosphate)
Transcription regulator (Homolog to phosphate uptake regulator) {ECO:0000313|EMBL:CAI48784.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
sw_8_scaffold_249_15
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12216..13283)
DNA (1068bp) protein (356aa)
ATP-NAD/AcoX kinase n=2 Tax=Haloarcula hispanica RepID=G0HR86_HALHT
N-acetylglucosamine-1-phosphate uridyltransferase
N-acetylglucosamine-1-phosphate uridyltransferase {ECO:0000313|EMBL:AJF27002.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
sw_8_scaffold_249_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13640..15832
DNA (2193bp) protein (731aa)
tgt2; archaeosine tRNA-ribosyltransferase (EC:2.4.2.-)
Archaeosine tRNA-ribosyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5J3_HALJP
Archaeosine tRNA-ribosyltransferase {ECO:0000313|EMBL:EMA28816.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japo
sw_8_scaffold_249_17
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15829..16629)
DNA (801bp) protein (267aa)
Hydrolase ( hydroxyacylglutathione hydrolase ) 3 n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C1J8_9EURY
Hydrolase (Hydroxyacylglutathione hydrolase) 3 {ECO:0000313|EMBL:ELZ17070.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
hydrolase ( hydroxyacylglutathione hydrolase ) 3
sw_8_scaffold_249_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16715..16987
DNA (273bp) protein (91aa)
MoaD family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU03_NATM8
moaD2; MoaD family protein
Ubiquitin-like modifier protein SAMP3 {ECO:0000313|EMBL:CCQ37984.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_8_scaffold_249_19
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16984..17238
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8Z5_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14330.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_8_scaffold_249_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17240..17605
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7R024_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89918.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_8_scaffold_249_21
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17614..18501)
DNA (888bp) protein (296aa)
Alpha/beta hydrolase fold protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JMW2_NATP1
putative hydrolase or acyltransferase of alpha/beta superfamily
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELY74961.1}; Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AGB32183.1}; TaxID=797303 species="Archaea; Euryarcha
sw_8_scaffold_249_22
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18858..19394
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IHU7_9EURY
Membrane protein {ECO:0000313|EMBL:AHG03190.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
membrane protein
sw_8_scaffold_249_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19388..20137)
DNA (750bp) protein (250aa)
PHP domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITN3_NATPD
hypothetical protein
PHP domain protein {ECO:0000313|EMBL:CAI48500.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_8_scaffold_249_24
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20312..20626
DNA (315bp) protein (105aa)
Zinc finger C2H2-type domain protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFI0_9EURY
zinc finger C2H2-type domain protein
Zinc finger C2H2-type domain protein {ECO:0000313|EMBL:ERJ06476.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus t
sw_8_scaffold_249_25
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20615..21802)
DNA (1188bp) protein (396aa)
Major facilitator superfamily protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C6R1_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:ELZ18961.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena th
cyanate permease
sw_8_scaffold_249_26
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21912..23012
DNA (1101bp) protein (367aa)
Aminotransferase class I and II n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J6U7_HALJB
class I and II aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ADJ15900.1}; Class I and II aminotransferase {ECO:0000313|EMBL:ELY37996.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
sw_8_scaffold_249_27
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23179..23514
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WD34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY46228.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_8_scaffold_249_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23552..25030
DNA (1479bp) protein (493aa)
tgtA1; 7-cyano-7-deazaguanine tRNA-ribosyltransferase (EC:2.4.2.29)
tRNA-guanine(15) transglycosylase {ECO:0000255|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000255|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01634}; A
tRNA-guanine(15) transglycosylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=ATGT_NATPD
sw_8_scaffold_249_29
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25344..25859
DNA (516bp) protein (172aa)
competence/damage-inducible protein cina-like protein; K03743 id=24613613 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Competence/damage-inducible protein cina-like protein {ECO:0000313|EMBL:ESP89905.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonu
competence/damage-inducible protein cina-like protein
sw_8_scaffold_249_30
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26079..28016)
DNA (1938bp) protein (646aa)
Aldehyde ferredoxin oxidoreductase {ECO:0000313|EMBL:CCQ37778.1}; EC=1.2.7.5 {ECO:0000313|EMBL:CCQ37778.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
aor1; aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y5D7_NATM8
Displaying items 1-30 of 38 in total

View Taxonomy