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sw_8_scaffold_259

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_259_1
unknown

Not on your lists

161..1024
DNA (864bp) protein (288aa)

This feature has no annotations

sw_8_scaffold_259_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1031..2071
DNA (1041bp) protein (347aa)
arcB; ornithine cyclodeaminase (EC:4.3.1.12)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=348780 species="Archaea; Euryarchaeota; Ha
Alanine dehydrogenase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU68_NATPD
sw_8_scaffold_259_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2163..6575
DNA (4413bp) protein (1471aa)
Replication factor C small subunit n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGH3_9EURY
Replication factor C small subunit {ECO:0000313|EMBL:CCQ33862.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tia
replication factor C small subunit
sw_8_scaffold_259_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6676..7356)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQD2_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA23426.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_8_scaffold_259_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7353..8267)
DNA (915bp) protein (305aa)
GAF sensor protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQ21_HALAR
GAF sensor protein {ECO:0000313|EMBL:EMA23427.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 122
GAF sensor protein
sw_8_scaffold_259_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8532..11306
DNA (2775bp) protein (925aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y551_NATM8
sw_8_scaffold_259_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11550..12641)
DNA (1092bp) protein (364aa)
sufS2; probable cysteine desulfurase (EC:2.8.1.7)
Probable cysteine desulfurase {ECO:0000313|EMBL:CCQ35220.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CCQ35220.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
Probable cysteine desulfurase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMW4_NATM8
sw_8_scaffold_259_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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12721..13485
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P3E1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64343.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_8_scaffold_259_9
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13482..14192
DNA (711bp) protein (237aa)
Methyltransferase type 11 n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PCJ2_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA64344.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.
methyltransferase type 11
sw_8_scaffold_259_10
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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14216..14926
DNA (711bp) protein (237aa)
3-oxoadipate enol-lactonase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GWY9_9EURY
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:ELZ75997.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917
pca; 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
sw_8_scaffold_259_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14926..15633
DNA (708bp) protein (236aa)
Glutamine amidotransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0K9_9EURY
Glutamine amidotransferase {ECO:0000313|EMBL:ELZ28227.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
GMP synthase
sw_8_scaffold_259_12
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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15888..16892
DNA (1005bp) protein (335aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BLU8_9EURY
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ELZ11840.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Halot
acyl-CoA dehydrogenase
sw_8_scaffold_259_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17000..17557
DNA (558bp) protein (186aa)
DUF1684 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITG3_NATPD
hypothetical protein
DUF1684 family protein {ECO:0000313|EMBL:CAI48570.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
sw_8_scaffold_259_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17569..18222)
DNA (654bp) protein (218aa)
TrkA protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZI32_9EURY
TrkA protein {ECO:0000313|EMBL:EJN60365.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
trkA; K+ transport systems, NAD-binding protein
sw_8_scaffold_259_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18244..19686)
DNA (1443bp) protein (481aa)
Amino acid permease-associated region n=1 Tax=Halogranum salarium B-1 RepID=J3JGT2_9EURY
Amino acid permease-associated region {ECO:0000313|EMBL:EJN60366.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
cat2; cationic amino acid transport protein
sw_8_scaffold_259_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19739..20431)
DNA (693bp) protein (231aa)
Methyltransferase type 11 n=1 Tax=Halogranum salarium B-1 RepID=J3JGB0_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EJN59941.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
scm; 24-sterol C-methyltransferase
sw_8_scaffold_259_17
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20885..21463
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YXW6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY79075.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
hypothetical protein
sw_8_scaffold_259_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21460..22251)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBV8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55038.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_8_scaffold_259_19
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22423..22827
DNA (405bp) protein (135aa)
Endoribonuclease L-PSP n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VTC8_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:ELY40306.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
endoribonuclease L-PSP
sw_8_scaffold_259_20
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22909..23829)
DNA (921bp) protein (307aa)
DNA damage-inducible protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNX5_9EURY
MATE efflux family protein
DNA damage-inducible protein {ECO:0000313|EMBL:ERJ05362.1}; MATE efflux family protein {ECO:0000313|EMBL:CCQ33632.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_8_scaffold_259_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24275..25366)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMW7_NATM8
hypothetical protein
Origin-associated protein OapC {ECO:0000313|EMBL:CCQ35214.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_8_scaffold_259_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25373..25762)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITZ6_NATPD
hypothetical protein
Origin-associated protein OapB {ECO:0000313|EMBL:CAI48387.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
sw_8_scaffold_259_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25766..27025)
DNA (1260bp) protein (420aa)
GTP-binding protein Era n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITZ5_NATPD
GTP-binding protein
Origin-associated GTP-binding protein OapA {ECO:0000313|EMBL:CAI48388.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
sw_8_scaffold_259_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28212..29843
DNA (1632bp) protein (544aa)
ORC1-type DNA replication protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITZ4_NATPD
cdc6_1; cell division control protein cdc6-like protein
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_8_scaffold_259_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29956..30378
DNA (423bp) protein (141aa)
PolA operon protein ( DNA-binding protein) n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3V3_9EURY
PolA operon protein ( DNA-binding protein) {ECO:0000313|EMBL:ELZ29503.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimp
DUF296 family protein
sw_8_scaffold_259_26
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30378..33614
DNA (3237bp) protein (1079aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1261545 species="Archaea; Eurya
DNA polymerase type II, large subunit (EC:2.7.7.7)
DNA polymerase II large subunit n=2 Tax=Halarchaeum acidiphilum RepID=U2YCD7_9EURY
sw_8_scaffold_259_27
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

33637..34539
DNA (903bp) protein (301aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324, ECO:0000313|EMBL:ELY65115.1}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=12
DNA polymerase type II, large subunit (EC:2.7.7.7)
DNA polymerase II large subunit n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XTL4_9EURY
Displaying 27 items

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