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sw_8_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 150 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_40_1
unknown

Not on your lists

comp(2..160)
DNA (159bp) protein (53aa)

This feature has no annotations

sw_8_scaffold_40_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(220..699)
DNA (480bp) protein (160aa)
pdaD; pyruvoyl-dependent arginine decarboxylase (EC:4.1.1.19)
Pyruvoyl-dependent arginine decarboxylase {ECO:0000313|EMBL:CCQ37057.1}; EC=4.1.1.19 {ECO:0000313|EMBL:CCQ37057.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Pyruvoyl-dependent arginine decarboxylase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS26_NATM8
sw_8_scaffold_40_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

784..1086
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4B2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29497.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_8_scaffold_40_4
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1124..2425)
DNA (1302bp) protein (434aa)
aceB; malate synthase (EC:4.1.3.34)
Malate synthase {ECO:0000313|EMBL:AFK19770.1}; EC=4.1.3.34 {ECO:0000313|EMBL:AFK19770.1};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sourc
Malate synthase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R6B0_HALMT
sw_8_scaffold_40_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2529..3623)
DNA (1095bp) protein (365aa)
aceA; isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase {ECO:0000313|EMBL:CCQ36524.1}; EC=4.1.3.1 {ECO:0000313|EMBL:CCQ36524.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;
Isocitrate lyase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQX5_NATM8
sw_8_scaffold_40_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3831..4703
DNA (873bp) protein (291aa)
UDP-glucose 4-epimerase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KEV9_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA19378.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
UDP-glucose 4-epimerase
sw_8_scaffold_40_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5067..6248)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQA9_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66671.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_8_scaffold_40_8
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6407..8374
DNA (1968bp) protein (656aa)
rmeM1; type I restriction-modification system DNA-methyltransferase RmeM (EC:2.1.1.-)
Type I restriction-modification system DNA-methyltransferase rmeM n=1 Tax=Natrinema gari JCM 14663 RepID=L9YUY6_9EURY
Type I restriction-modification system DNA-methyltransferase rmeM {ECO:0000313|EMBL:ELY77939.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;"
sw_8_scaffold_40_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8317..9204
DNA (888bp) protein (296aa)
type I restriction-modification enzyme, S subunit; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] id=24615212 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Type I restriction-modification enzyme, S subunit {ECO:0000313|EMBL:ESP88376.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;"
type I restriction-modification enzyme, S subunit
sw_8_scaffold_40_10
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9197..12157
DNA (2961bp) protein (987aa)
rmeR2; type I site-specific deoxyribonuclease subunit rmeR (EC:3.1.21.3)
Type I site-specific deoxyribonuclease subunit rmeR n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EE86_9EURY
Type I site-specific deoxyribonuclease subunit rmeR {ECO:0000313|EMBL:ELZ46096.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
sw_8_scaffold_40_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12150..12872
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MES1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44252.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
DUF45 family protein
sw_8_scaffold_40_trna_2
unknown

Not on your lists

comp(12969..13040)
DNA (72bp)
transferRNA
sw_8_scaffold_40_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13070..13738)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDD8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55558.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_8_scaffold_40_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13799..14509
DNA (711bp) protein (237aa)
fadA2; enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CCQ36381.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CCQ36381.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
Enoyl-CoA hydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1N1_NATM8
sw_8_scaffold_40_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14536..15153
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CFH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21117.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_8_scaffold_40_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15200..15757
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4E8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40687.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_8_scaffold_40_16
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15759..16217)
DNA (459bp) protein (153aa)
DNA-binding protein, tfx family n=1 Tax=Halogranum salarium B-1 RepID=J3JG12_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ73973.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310
tfx; transcriptional regulator
sw_8_scaffold_40_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16214..16666)
DNA (453bp) protein (151aa)
Deoxyribonuclease/rho domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7M2_9EURY
Deoxyribonuclease/rho domain-containing protein {ECO:0000313|EMBL:EMA53119.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
deoxyribonuclease/rho domain-containing protein
sw_8_scaffold_40_18
unknown

Not on your lists

16788..17480
DNA (693bp) protein (231aa)

This feature has no annotations

sw_8_scaffold_40_19
unknown

Not on your lists

comp(17493..18020)
DNA (528bp) protein (176aa)

This feature has no annotations

sw_8_scaffold_40_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18243..19235)
DNA (993bp) protein (331aa)
radical SAM protein n=1 Tax=Halomicrobium katesii RepID=UPI0003741E37
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACV47065.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohata
sw_8_scaffold_40_21
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19393..19827
DNA (435bp) protein (145aa)
Polysaccharide biosynthesis protein GtrA n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SS41_9EURY
GtrA family protein {ECO:0000313|EMBL:ELY71014.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
GtrA family protein
sw_8_scaffold_40_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19852..20934
DNA (1083bp) protein (361aa)
DUF373 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZH0_NATM8
DUF373 family protein
DUF373 family protein {ECO:0000313|EMBL:CCQ35561.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_8_scaffold_40_23
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20956..21810)
DNA (855bp) protein (285aa)
Farnesyl-pyrrophosphate synthase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KNG4_HALAR
Farnesyl-pyrrophosphate synthase {ECO:0000313|EMBL:EMA22448.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argenti
fps; farnesyl-pyrrophosphate synthase
sw_8_scaffold_40_24
unknown

Not on your lists

21897..22202
DNA (306bp) protein (102aa)

This feature has no annotations

sw_8_scaffold_40_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22651..23616)
DNA (966bp) protein (322aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQC1_NATPD
etfA; electron transfer flavoprotein, alpha subunit
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:CAI49675.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natro
sw_8_scaffold_40_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23613..24413)
DNA (801bp) protein (267aa)
Electron transfer flavoprotein beta subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XK77_NATM8
etfB; electron transfer flavoprotein beta subunit
Electron transfer flavoprotein beta subunit {ECO:0000313|EMBL:CCQ35402.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natron
sw_8_scaffold_40_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24496..25599)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAU7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42468.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_8_scaffold_40_28
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25706..27010
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UXZ6_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKH96713.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
sw_8_scaffold_40_29
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27036..27512
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NXX1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39363.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
archaeal flagellin-like protein
Displaying items 1-30 of 150 in total

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