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sw_8_scaffold_413

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_413_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..424)
DNA (423bp) protein (141aa)
Transposase, is605 orfb family n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP98_9EURY
Transposase, is605 orfb family {ECO:0000313|EMBL:ELZ24227.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
transposase, IS605 OrfB family, central region
sw_8_scaffold_413_2
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(429..557)
DNA (129bp) protein (43aa)
hypothetical protein
hypothetical protein id=24649930 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:AFZ72755.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_8_scaffold_413_3
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(913..1842)
DNA (930bp) protein (310aa)
Transposase, IS605 OrfB family protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HMP8_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELZ85033.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongan
IS1341-type transposase
sw_8_scaffold_413_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2338..3363
DNA (1026bp) protein (342aa)
DUF1611 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRB1_NATPD
hypothetical protein
DUF1611 family protein {ECO:0000313|EMBL:CAI49332.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
sw_8_scaffold_413_5
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3360..4370
DNA (1011bp) protein (337aa)
tcbD; chloromuconate cycloisomerase (EC:5.5.1.7)
Chloromuconate cycloisomerase n=3 Tax=Haloferax RepID=M0F5W2_9EURY
Chloromuconate cycloisomerase {ECO:0000313|EMBL:ELZ66592.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645
sw_8_scaffold_413_6
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4435..6360
DNA (1926bp) protein (642aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000313|EMBL:ELZ86534.1};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U244_9EURY
sw_8_scaffold_413_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6364..7365)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MV39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49198.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_8_scaffold_413_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7417..8223)
DNA (807bp) protein (269aa)
Phage shock protein A, PspA n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEA7_9EURY
Phage shock protein A, PspA {ECO:0000313|EMBL:EMA44061.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
pspA1; PspA domain protein
sw_8_scaffold_413_9

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8314..8673
DNA (360bp) protein (120aa)
Putative transcriptional regulator n=1 Tax=uncultured archaeon A07HN63 RepID=V4XI92_9ARCH
Putative transcriptional regulator {ECO:0000313|EMBL:ESS07959.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_8_scaffold_413_10

Not on your lists

8670..9626
DNA (957bp) protein (319aa)
Growth inhibitor n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y007_9ARCH
Growth inhibitor {ECO:0000313|EMBL:ESS07958.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_8_scaffold_413_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9844..10956
DNA (1113bp) protein (371aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:CAI48689.1}; EC=2.7.9.2 {ECO:0000313|EMBL:CAI48689.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Phosphoenolpyruvate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT45_NATPD
sw_8_scaffold_413_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10953..12137
DNA (1185bp) protein (395aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:CAI48689.1}; EC=2.7.9.2 {ECO:0000313|EMBL:CAI48689.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Phosphoenolpyruvate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT45_NATPD
sw_8_scaffold_413_13

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12197..12619
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2ML51_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05528.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_8_scaffold_413_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12620..13408
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUC8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49231.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_8_scaffold_413_15
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13438..13650
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JHB5_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB30248.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_8_scaffold_413_16
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13836..14366
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R742_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK20052.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_8_scaffold_413_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14492..14722
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3S5_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47747.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_413_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14783..17317
DNA (2535bp) protein (845aa)
Extracellular solute-binding protein family 5 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HIP9_9EURY
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ESP87789.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" sou
extracellular solute-binding protein family 5
sw_8_scaffold_413_19
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17314..18411
DNA (1098bp) protein (366aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRX7_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ESP87791.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatu
binding-protein-dependent transporters inner membrane component
sw_8_scaffold_413_20
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18411..19592
DNA (1182bp) protein (394aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EAA0_9EURY
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I {ECO:0000313|EMBL:ELZ43812.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
dppD; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I
sw_8_scaffold_413_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19589..20653
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000362CD54
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EMA46548.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein II
sw_8_scaffold_413_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20701..21192
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40531.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_8_scaffold_413_23
unknown

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21229..22611
DNA (1383bp) protein (461aa)

This feature has no annotations

sw_8_scaffold_413_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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22690..25812
DNA (3123bp) protein (1041aa)
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210
Carbamoyl-phosphate synthase large chain n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INF9_NATPD
Displaying 24 items

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