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sw_8_scaffold_424

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_424_16S_1
unknown

Not on your lists

comp(3..786)
DNA (784bp)
sw_8_scaffold_424_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1515..1820)
DNA (306bp) protein (102aa)
Nonhistone chromosomal protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMY0_NATM8
nonhistone chromosomal protein
Nonhistone chromosomal protein {ECO:0000313|EMBL:CCQ35240.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_8_scaffold_424_2
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2033..2230
DNA (198bp) protein (66aa)
hypothetical protein id=24616145 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87971.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_8_scaffold_424_3
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2634..3281
DNA (648bp) protein (216aa)
dihydroorotate dehydrogenase 2 (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=24620882 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
Dihydroorotate dehydrogenase, subfamily 2 {ECO:0000313|EMBL:ERH02800.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp
sw_8_scaffold_424_4
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3308..5044)
DNA (1737bp) protein (579aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284, ECO:0000313|EMBL:EMA33818.1};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LL60_9EURY
phenylalanyl-tRNA synthetase, beta subunit
sw_8_scaffold_424_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5044..6549)
DNA (1506bp) protein (502aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000313|EMBL:CAI48439.1}; EC=6.1.1.20 {ECO:0000313|EMBL:CAI48439.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITU4_NATPD
sw_8_scaffold_424_6
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6936..8102)
DNA (1167bp) protein (389aa)
Glycine/D-amino acid oxidase, deaminating n=1 Tax=Natronococcus occultus SP4 RepID=L0JYQ3_9EURY
glycine/D-amino acid oxidase, deaminating
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:AGB37430.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus
sw_8_scaffold_424_7
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8157..9791)
DNA (1635bp) protein (545aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000313|EMBL:ELZ15803.1};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; T
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BZE5_9EURY
sw_8_scaffold_424_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10023..10559
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43171.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
sw_8_scaffold_424_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10556..11257
DNA (702bp) protein (234aa)
Demethylmenaquinone methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFH0_9EURY
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:EMA43170.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
trans-aconitate 2-methyltransferase
sw_8_scaffold_424_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11258..12307)
DNA (1050bp) protein (350aa)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=662477 species="Archaea;
tRNA splicing endonuclease (EC:4.6.1.16)
tRNA-splicing endonuclease n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JHN0_HALVA
sw_8_scaffold_424_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12339..13046)
DNA (708bp) protein (236aa)
DNA topoisomerase type IA zn finger domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU4_9EURY
DNA topoisomerase type IA zn finger domain protein {ECO:0000313|EMBL:EMA43168.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
DNA topoisomerase type IA Zn finger domain protein
sw_8_scaffold_424_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13073..13318)
DNA (246bp) protein (82aa)
UPF0213 protein NP_0776A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Y776_NATPD
hypothetical protein
UPF0213 protein NP_0776A; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) (
sw_8_scaffold_424_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13367..13522)
DNA (156bp) protein (52aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMW2_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ35227.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_8_scaffold_424_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13611..14384)
DNA (774bp) protein (258aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZA5_9EURY
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:ELZ27772.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
sw_8_scaffold_424_15
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14554..14721
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Natrialba RepID=L9ZR38_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ06674.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
hypothetical protein
sw_8_scaffold_424_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14780..15481)
DNA (702bp) protein (234aa)
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000255|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000255|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000255|HAMAP-Rule:MF_00170}; Short=PRI {ECO:0000255|HAMAP-
Ribose-5-phosphate isomerase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RPIA_NATPD
sw_8_scaffold_424_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15559..15759)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN33_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93828.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_8_scaffold_424_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15923..16558
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D353_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29283.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
zinc finger SWIM domain-containing protein
sw_8_scaffold_424_19
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16752..17018
DNA (267bp) protein (89aa)
Uncharacterized protein id=24632160 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Uncharacterized protein {ECO:0000313|EMBL:ERG93911.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
sw_8_scaffold_424_20
unknown

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17105..17179
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 21 items

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