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sw_8_scaffold_489

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_489_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..82
DNA (81bp) protein (27aa)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ELZ29229.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
sw_8_scaffold_489_2
unknown

Not on your lists

435..959
DNA (525bp) protein (175aa)

This feature has no annotations

sw_8_scaffold_489_3
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1055..2830
DNA (1776bp) protein (592aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:ELY25797.1}; Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ADD04401.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ADD04401.1};; TaxID=547559 sp
Methylmalonyl-CoA mutase large subunit n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T043_NATMM
sw_8_scaffold_489_4
unknown

Not on your lists

comp(2837..3070)
DNA (234bp) protein (78aa)

This feature has no annotations

sw_8_scaffold_489_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3112..5208)
DNA (2097bp) protein (699aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=268739 species="Archaea; E
metS; methionine--tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSM1_NATM8
sw_8_scaffold_489_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5781..6326)
DNA (546bp) protein (182aa)
Conserved hypothetical membrane protein, SNARE-associated Golgi protein family n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNC7_9EURY
conserved hypothetical membrane protein, SNARE-associated Golgi protein family
Conserved hypothetical membrane protein, SNARE-associated Golgi protein family {ECO:0000313|EMBL:CCQ34601.1}; Membrane protein YqaA {ECO:0000313|EMBL:ERJ05078.1}; TaxID=1033806 species="Archaea; Eurya
sw_8_scaffold_489_7
unknown

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comp(6383..7138)
DNA (756bp) protein (252aa)

This feature has no annotations

sw_8_scaffold_489_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7718..8608
DNA (891bp) protein (297aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LYX5_9EURY
Enoyl-CoA hydratase {ECO:0000313|EMBL:EMA38782.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
sw_8_scaffold_489_9
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8641..9960)
DNA (1320bp) protein (440aa)
Multidrug resistance protein-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQW9_HALAR
Multidrug resistance protein-like protein {ECO:0000313|EMBL:EMA23616.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
major facilitator superfamily protein
sw_8_scaffold_489_10

Not on your lists

comp(10060..10926)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XTQ4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11959.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_8_scaffold_489_11
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11091..11558
DNA (468bp) protein (156aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferaca
DNA-directed RNA polymerase subunit n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0H920_9EURY
DNA-directed RNA polymerase subunit M homolog
sw_8_scaffold_489_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11652..11954
DNA (303bp) protein (101aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
DNA-directed RNA polymerase subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTJ3_NATM8
tfs1; transcription elongation factor TFS
sw_8_scaffold_489_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11991..12539
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KMS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA21449.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_8_scaffold_489_14
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12532..12909)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EL75_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ47858.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
hypothetical protein
sw_8_scaffold_489_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12893..13135)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWK3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48213.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_489_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13190..13927)
DNA (738bp) protein (246aa)
trmI; tRNA (adenine-N(1))-methyltransferase TrmI (EC:2.1.1.219)
tRNA (Adenine-N(1))-methyltransferase TrmI {ECO:0000313|EMBL:CCQ37829.1}; EC=2.1.1.219 {ECO:0000313|EMBL:CCQ37829.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
tRNA (Adenine-N1-)-methyltransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQK6_HALAR
sw_8_scaffold_489_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13924..14322)
DNA (399bp) protein (133aa)
Nascent polypeptide-associated complex protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW56_9EURY
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
nac; nascent polypeptide-associated complex protein
sw_8_scaffold_489_18

Not on your lists

comp(14775..15281)
DNA (507bp) protein (169aa)
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y232_9ARCH
Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit {ECO:0000313|EMBL:ESS08748.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon
prefoldin subunit alpha
sw_8_scaffold_489_19
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15330..16412)
DNA (1083bp) protein (361aa)
Peptidase M20-M25-M40 superfamily protein (EC:3.4.-.-)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0GP73_HALL2
Acetylornithine deacetylase {ECO:0000313|EMBL:CQR50418.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
sw_8_scaffold_489_20
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16405..17271)
DNA (867bp) protein (289aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000313|EMBL:ELZ85704.1}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1
Diaminopimelate epimerase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HRF9_9EURY
diaminopimelate epimerase
sw_8_scaffold_489_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17268..18422)
DNA (1155bp) protein (385aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Halogranum salarium B-1 RepID=J3A4L3_9EURY
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
sw_8_scaffold_489_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18419..19300)
DNA (882bp) protein (294aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:CAI48838.1}; EC=2.3.1.117 {ECO:0000313|EMBL:CAI48838.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteri
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISP8_NATPD
sw_8_scaffold_489_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19297..20025)
DNA (729bp) protein (243aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000255|HAMAP-Rule:MF_00102}; Short=HTPA reductase {ECO:0000255|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000255|HAMAP-Rule:MF_00102};; TaxID=348780 spec
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DAPB_NATPD
sw_8_scaffold_489_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20022..20921)
DNA (900bp) protein (300aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=348780 species
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DAPA_NATPD
sw_8_scaffold_489_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21182..21679
DNA (498bp) protein (166aa)
hypothetical protein
hypothetical protein id=24614651 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88881.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
sw_8_scaffold_489_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21671..23044)
DNA (1374bp) protein (458aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK10_9EURY
sw_8_scaffold_489_27
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23211..24797
DNA (1587bp) protein (529aa)
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent n=1 Tax=Halogranum salarium B-1 RepID=J3JGU5_9EURY
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent {ECO:0000313|EMBL:EJN60401.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.
phosphoribosylformylglycinamidine synthase, clade II
sw_8_scaffold_489_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24843..25343)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQB9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49677.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_8_scaffold_489_trna_1
unknown

Not on your lists

comp(25395..25479)
DNA (85bp)
transferRNA
sw_8_scaffold_489_29
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25639..25974)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKP7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36282.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
Displaying items 1-30 of 33 in total

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