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sw_8_scaffold_501

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_501_1
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..300)
DNA (300bp) protein (100aa)
Transposase, IS605 OrfB family protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9WCB4_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELY45958.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum t
ntp; transposase
sw_8_scaffold_501_2

Not on your lists

470..841
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XW38_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS06428.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_8_scaffold_501_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

916..1245
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D567_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29314.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_8_scaffold_501_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1294..2814
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27495.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_8_scaffold_501_5
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2804..3244)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NUP8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34123.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_8_scaffold_501_6
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3319..4488
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GV99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ75488.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hypothetical protein
sw_8_scaffold_501_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4302..4871)
DNA (570bp) protein (190aa)
Receiver box response regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSK8_NATM8
receiver box response regulator
Receiver box response regulator {ECO:0000313|EMBL:CCQ37360.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moola
sw_8_scaffold_501_trna_1
unknown

Not on your lists

comp(5245..5317)
DNA (73bp)
transferRNA
sw_8_scaffold_501_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5554..5781
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EMA32044.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:EMA32044.1};; TaxID=358396 species="
DNA-directed RNA polymerase subunit H n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LI08_9EURY
DNA-directed RNA polymerase, subunit H, RpoH/RPB5
sw_8_scaffold_501_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5782..7254
DNA (1473bp) protein (491aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:CAI48146.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48146.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
rpoB2; DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta'' n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTR0_9EURY
sw_8_scaffold_501_10
Halobacteriaceae archaeon YC89, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7256..9085
DNA (1830bp) protein (610aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1126241 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
rpoB1; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
RNA polymerase subunit B n=1 Tax=Halorientalis regularis RepID=U3MZG6_9EURY
sw_8_scaffold_501_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9179..12172
DNA (2994bp) protein (998aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYI6_HALMD
DNA-directed RNA polymerase subunit A'
sw_8_scaffold_501_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12165..13244
DNA (1080bp) protein (360aa)
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD
sw_8_scaffold_501_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13210..14787
DNA (1578bp) protein (526aa)
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD
sw_8_scaffold_501_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14829..15647
DNA (819bp) protein (273aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
transcription elongation factor NusA-like protein
sw_8_scaffold_501_15

Not on your lists

16601..17041
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q638_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESS08662.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_8_scaffold_501_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17105..17533
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGL6_9EURY
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
sw_8_scaffold_501_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17530..18147
DNA (618bp) protein (206aa)
30S ribosomal protein S7 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYI2_HALMD
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.
sw_8_scaffold_501_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18268..18555
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0Q1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48424.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_8_scaffold_501_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18765..19262
DNA (498bp) protein (166aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Dehydrogenase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PHT2_9EURY
Dehydrogenase {ECO:0000313|EMBL:ERH09971.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_8_scaffold_501_20
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19342..20574
DNA (1233bp) protein (411aa)
mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YR83_9EURY
mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:ELY76186.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema
epf3; mRNA 3'-end processing factor/RNA-metabolising metallo-beta-lactamase
sw_8_scaffold_501_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20616..21185
DNA (570bp) protein (190aa)
HAD superfamily hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTU9_NATM8
HAD superfamily hydrolase
HAD superfamily hydrolase {ECO:0000313|EMBL:CCQ37871.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_8_scaffold_501_22
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21182..21913)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C6P5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ18946.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
sw_8_scaffold_501_23
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22406..22648
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DA85_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH38157.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_8_scaffold_501_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22886..23068)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEX0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43224.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_8_scaffold_501_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23130..25553)
DNA (2424bp) protein (808aa)
DEAD/DEAH box helicase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4S1_9EURY
DEAD/DEAH box helicase {ECO:0000313|EMBL:ELZ29164.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
DEAD/DEAH box helicase domain protein
sw_8_scaffold_501_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25534..26970)
DNA (1437bp) protein (479aa)
MATE efflux family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXG1_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA49993.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
sw_8_scaffold_501_27
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(27114..29765)
DNA (2652bp) protein (884aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:ELZ19529.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1230
Leucyl-tRNA ligase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CCD0_9EURY
leucyl-tRNA synthetase
sw_8_scaffold_501_28
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30026..31039)
DNA (1014bp) protein (338aa)
DNA primase large subunit PriL n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITU9_NATPD
priB; DNA primase large subunit
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas ph
sw_8_scaffold_501_29
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31294..32154)
DNA (861bp) protein (287aa)
sseA2; thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KKF5_9EURY
Thiosulfate sulfurtransferase {ECO:0000313|EMBL:EMA20300.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae
Displaying items 1-30 of 31 in total

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