ggKbase home page

sw_8_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_62_1
unknown

Not on your lists

comp(2..199)
DNA (198bp) protein (66aa)

This feature has no annotations

sw_8_scaffold_62_2
unknown

Not on your lists

comp(258..1118)
DNA (861bp) protein (287aa)

This feature has no annotations

sw_8_scaffold_62_3
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1277..2107
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G2T2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ65124.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
hypothetical protein
sw_8_scaffold_62_4
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2383..3312
DNA (930bp) protein (310aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GP61_9EURY
Intracellular serine protease {ECO:0000313|EMBL:CQR50523.1}; Flags: Precursor;; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofer
sub; peptidase S8 and S53 subtilisin kexin sedolisin
sw_8_scaffold_62_5

Not on your lists

comp(3540..4328)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MP53_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07627.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_8_scaffold_62_6
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4439..4735)
DNA (297bp) protein (99aa)
Plasmid stabilization system n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HX76_9EURY
Plasmid stabilization system {ECO:0000313|EMBL:ELZ89091.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC
hypothetical protein
sw_8_scaffold_62_7
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4728..4919)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FGT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ58523.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_8_scaffold_62_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5219..6568
DNA (1350bp) protein (450aa)
Kynureninase {ECO:0000256|PIRNR:PIRNR038800, ECO:0000313|EMBL:ELZ32820.1}; EC=3.7.1.3 {ECO:0000256|PIRNR:PIRNR038800};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
kynU; kynureninase (EC:3.7.1.3)
Kynureninase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DBE5_9EURY
sw_8_scaffold_62_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6614..7216
DNA (603bp) protein (201aa)
Transcriptional regulator n=1 Tax=Halogranum salarium B-1 RepID=J3EVW2_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EJN58857.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
AraC family transcriptional regulator
sw_8_scaffold_62_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7391..8125
DNA (735bp) protein (245aa)
3'-5' exonuclease n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXY2_9EURY
3'-5' exonuclease {ECO:0000313|EMBL:EMA50173.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 1355
hypothetical protein
sw_8_scaffold_62_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8122..8928
DNA (807bp) protein (269aa)
lplA; lipoate-protein ligase (EC:6.3.4.-)
Biotin/lipoate A/B protein ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2J1_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EMA39921.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameli
sw_8_scaffold_62_12

Not on your lists

comp(8965..9837)
DNA (873bp) protein (291aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter ATP-binding protein, PhoT family n=1 Tax=uncultured archaeon A07HR60 RepID=V5A5T4_9ARCH
pstB; phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1)
sw_8_scaffold_62_13

Not on your lists

comp(9837..11459)
DNA (1623bp) protein (541aa)
Phosphate ABC transporter, permease protein PstA n=1 Tax=uncultured archaeon A07HR60 RepID=V4XQY1_9ARCH
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:ESS10914.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
phosphate ABC transporter, permease protein PstA
sw_8_scaffold_62_14

Not on your lists

comp(11459..12406)
DNA (948bp) protein (316aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y7Q6_9ARCH
Phosphate ABC transporter membrane protein 1, PhoT family {ECO:0000313|EMBL:ESS10913.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
phosphate ABC transporter, inner membrane subunit PstC
sw_8_scaffold_62_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12491..13510)
DNA (1020bp) protein (340aa)
Phosphate ABC transporter substrate-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JTK4_HALVA
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA11304.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
pstS1; ABC-type transport system periplasmic substrate-binding protein (probable substrate phosphate)
sw_8_scaffold_62_16
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13664..14113
DNA (450bp) protein (150aa)
Peroxiredoxin n=1 Tax=Halonotius sp. J07HN4 RepID=U1QHR8_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ERH06388.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
bcp2; bacterioferritin comigratory protein
sw_8_scaffold_62_17
unknown

Not on your lists

14159..14251
DNA (93bp) protein (31aa)

This feature has no annotations

sw_8_scaffold_62_18
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14278..14670)
DNA (393bp) protein (131aa)
Pectin degradation protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XDL5_9EURY
Pectin degradation protein {ECO:0000313|EMBL:ELY59814.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus
cupin domain-containing protein
sw_8_scaffold_62_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14674..15120)
DNA (447bp) protein (149aa)
ABC transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCP5_9EURY
ABC transporter {ECO:0000313|EMBL:EMA54864.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
nuclease
sw_8_scaffold_62_20
unknown

Not on your lists

15149..15469
DNA (321bp) protein (107aa)

This feature has no annotations

sw_8_scaffold_62_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15559..16260
DNA (702bp) protein (234aa)
Putative NAD(P)H nitroreductase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN99_9EURY
Putative NAD(P)H nitroreductase {ECO:0000313|EMBL:EFW93894.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
NAD(P)H nitroreductase
sw_8_scaffold_62_22
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16380..16925
DNA (546bp) protein (182aa)
Carboxymuconolactone decarboxylase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKS6_NATP1
carboxymuconolactone decarboxylase family protein
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ELY77794.1}; Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:AGB31859.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobac
sw_8_scaffold_62_23
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17581..18249)
DNA (669bp) protein (223aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=V5TNC1_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF27375.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_8_scaffold_62_24
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18473..19477
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9D0_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH36870.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_8_scaffold_62_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19671..20864)
DNA (1194bp) protein (398aa)
Cell division protein FtsZ n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMA6_NATPD
ftsZ_2; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_8_scaffold_62_26
uncultured haloarchaeon, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20866..21042)
DNA (177bp) protein (59aa)
CopG family protein n=3 Tax=Halobacteriaceae RepID=G0LK10_HALWC
transcription regulator
Probable transcriptional regulator {ECO:0000313|EMBL:ABQ75894.1}; TaxID=160804 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental samples.;" source="uncult
sw_8_scaffold_62_27
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21274..21801)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU61_NATM8
hypothetical protein
DZR domain protein {ECO:0000313|EMBL:CCQ38016.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
sw_8_scaffold_62_trna_1
unknown

Not on your lists

21962..22035
DNA (74bp)
transferRNA
sw_8_scaffold_62_28
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22225..23538)
DNA (1314bp) protein (438aa)
arylsulfatase; choline-sulfatase (EC:3.1.6.6 3.1.6.1)
Arylsulfatase A related enzyme (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZL4_9EURY
Arylsulfatase A related enzyme {ECO:0000313|EMBL:ERG89488.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_8_scaffold_62_29
unknown

Not on your lists

comp(24030..24188)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

View Taxonomy