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sw_8_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_8_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..861
DNA (861bp) protein (287aa)
RecJ domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQR6_NATPD
hypothetical protein
DHH/RecJ family phosphoesterase {ECO:0000313|EMBL:CAI49528.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_8_scaffold_8_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

866..2503
DNA (1638bp) protein (546aa)
Homolog to elongator complex protein ELP3 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQR7_NATPD
protein acetyltransferase
Homolog to elongator complex protein ELP3 {ECO:0000313|EMBL:CAI49527.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronom
sw_8_scaffold_8_3

Not on your lists

2543..3169
DNA (627bp) protein (209aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
uridine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XKN2_9ARCH
sw_8_scaffold_8_4
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3166..3480)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. J07HR59 RepID=U1NJ07_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC39403.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_8_scaffold_8_5
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3579..4319
DNA (741bp) protein (247aa)
Molybdopterin binding domain-containing protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A6N0_9EURY
Molybdopterin binding domain-containing protein {ECO:0000313|EMBL:ELY94229.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba
molybdopterin binding domain-containing protein
sw_8_scaffold_8_trna_1
unknown

Not on your lists

comp(4350..4433)
DNA (84bp)
transferRNA
sw_8_scaffold_8_6
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4474..5214)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HH01_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ83053.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
sw_8_scaffold_8_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5488..6711)
DNA (1224bp) protein (408aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNX5_9EURY
sw_8_scaffold_8_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6891..8171)
DNA (1281bp) protein (427aa)
5-enolpyruvylshikimate-3-phosphate synthase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CUS2_9EURY
sw_8_scaffold_8_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8270..9442
DNA (1173bp) protein (391aa)
pepQ; aminopeptidase (EC:3.4.11.9)
Peptidase M24 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQG7_NATPD
Peptidase M24 family protein (Homolog to Xaa-Pro dipeptidase) {ECO:0000313|EMBL:CAI49629.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_8_scaffold_8_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9551..10273
DNA (723bp) protein (241aa)
tyrA; prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase {ECO:0000313|EMBL:CAI49770.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CAI49770.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
Prephenate dehydrogenase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ28_NATPD
sw_8_scaffold_8_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10270..11667
DNA (1398bp) protein (466aa)
TyrA operon protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M033_9EURY
TyrA operon protein {ECO:0000313|EMBL:EMA37974.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
tyrA operon protein
sw_8_scaffold_8_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11703..12485
DNA (783bp) protein (261aa)
surE; acid phosphatase (EC:3.1.3.2)
5'-nucleotidase SurE {ECO:0000255|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000255|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00060}; TaxID=348780 spec
5'-nucleotidase SurE n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SURE_NATPD
sw_8_scaffold_8_13
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12545..13222
DNA (678bp) protein (226aa)
Carbonic anhydrase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KXZ2_9EURY
icfA1; carbonic anhydrase
Carbonic anhydrase {ECO:0000313|EMBL:EMA13661.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800
sw_8_scaffold_8_14
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13226..14674)
DNA (1449bp) protein (483aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
Phosphomethylpyrimidine synthase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HFW2_9EURY
thiC; thiamine biosynthesis protein ThiC
sw_8_scaffold_8_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15029..15511
DNA (483bp) protein (161aa)
Transcription regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNS6_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ24298.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
transcription regulator
sw_8_scaffold_8_16
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15530..16543)
DNA (1014bp) protein (338aa)
Cytosine deaminase-like metal-dependent hydrolase n=2 Tax=Halorubrum distributum RepID=M0F5J3_9EURY
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:ELZ56412.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halor
amidohydrolase
sw_8_scaffold_8_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16935..18419
DNA (1485bp) protein (495aa)
NADH dehydrogenase (Quinone) n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPH1_9EURY
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ELZ24297.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
TetR family transcriptional regulator
sw_8_scaffold_8_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18409..20835
DNA (2427bp) protein (809aa)
UPF0753 protein C475_13642 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CM19_9EURY
UPF0753 protein C475_13642 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
hypothetical protein
sw_8_scaffold_8_19
RIFOXYA1_FULL_Paenibacillus_44_5_curated, Firmicutes, Bacteria

Not on your lists

comp(21139..21588)
DNA (450bp) protein (150aa)
Acetyltransferase, GNAT family n=1 Tax=Paenibacillus sp. HGF5 RepID=F3MDH5_9BACL
acetyltransferase Tax=RIFOXYA1_FULL_Paenibacillus_44_5_curated
acetyltransferase
sw_8_scaffold_8_20
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21758..21997
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3ST83_NATMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD06950.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
sw_8_scaffold_8_21
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21994..22347
DNA (354bp) protein (118aa)
PemK-like growth inhibitor protein (MazF protein); K07171 mRNA interferase [EC:3.1.-.-] id=24632327 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Growth inhibitor {ECO:0000313|EMBL:ERG94077.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW2.;"
MazF family transcriptional regulator
sw_8_scaffold_8_22
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22453..22773)
DNA (321bp) protein (107aa)
Chorismate mutase n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP71_NATPD
Chorismate mutase {ECO:0000313|EMBL:ELY54663.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524
chorismate mutase
sw_8_scaffold_8_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22731..23576)
DNA (846bp) protein (282aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00370}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00370};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00370};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacte
Shikimate kinase n=2 Tax=Natronomonas pharaonis RepID=Q3IP70_NATPD
sw_8_scaffold_8_24
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23683..24111
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQP8_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36495.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_8_scaffold_8_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24111..24350
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUN8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91695.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_8_scaffold_8_26
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24344..24478)
DNA (135bp) protein (45aa)
Zinc finger C2H2-type domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3F4_HALJB
zinc finger C2H2-type domain-containing protein
Zinc finger C2H2-type domain protein {ECO:0000313|EMBL:ADJ15261.1}; Zinc finger C2H2-type domain-containing protein {ECO:0000313|EMBL:ELY35318.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobac
sw_8_scaffold_8_27
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24562..26688
DNA (2127bp) protein (709aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MCM1_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA42150.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
cdc48c; AAA-type ATPase (CDC48 subfamily)
sw_8_scaffold_8_28
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26758..27282
DNA (525bp) protein (175aa)
XRE family transcriptional regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0M4_9EURY
XRE family transcriptional regulator {ECO:0000313|EMBL:EMA39226.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ham
HTH DNA-binding protein
sw_8_scaffold_8_29
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27321..27959
DNA (639bp) protein (213aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W363_9EURY
Displaying items 1-30 of 54 in total

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