ggKbase home page

sw_8_scaffold_88_20

Organism: SW_8_Halobacteriales_67_36

near complete RP 34 / 55 MC: 4 BSCG 30 / 51 MC: 1 ASCG 36 / 38
Location: 13558..13911

Top 3 Functional Annotations

Value Algorithm Source
Transcription initiation factor IIB n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MFQ5_HALMO similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 117.0
  • Bit_score: 205
  • Evalue 2.30e-50
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 117.0
  • Bit_score: 207
  • Evalue 1.50e-50
Transcription factor TFIIB cyclin-related similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 117.0
  • Bit_score: 206
  • Evalue 3.90e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natronorubrum bangense → Natronorubrum → Natrialbales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 354
GTGTCGCGGGTCGAACGCAAGGAGATCGGTCGCACCTACCGGTACGTCTCACAGGAACTTGCCTTGGAGATGGAGCCGGTCGATCCGAAGAAGTACGTCCCGCGGTTCTGCTCGTCGCTCGGCGTGAGCGACGAGGTGCGCGCCAAGGCGAAAGAGATCATCGACACCACCGCCGAGCAGGGGTTGCTGTCGGGGAAATCGCCCACGGGGTACGCGGCGGCGGCCATCTACGCCGCCTCGCTGCTCTGTAACGAGAAGAAGACACAGCGCGAAGTGGCCGACGTCGCGCAGGTCACCGAGGTCACCATCCGCAACCGCTATCAAGAGCAGATCGAGGCGATGGAGCTGTACTGA
PROTEIN sequence
Length: 118
VSRVERKEIGRTYRYVSQELALEMEPVDPKKYVPRFCSSLGVSDEVRAKAKEIIDTTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTEVTIRNRYQEQIEAMELY*