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sw_8_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_88_trna_1
unknown

Not on your lists

26..96
DNA (71bp)
transferRNA
sw_8_scaffold_88_1
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(118..525)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BPK0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ12243.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_8_scaffold_88_2
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(522..791)
DNA (270bp) protein (90aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I8U7_HALRX
looped-hinge helix DNA binding domain, AbrB family
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:AGB15134.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Haloviva
sw_8_scaffold_88_3
unknown

Not on your lists

comp(784..1707)
DNA (924bp) protein (308aa)

This feature has no annotations

sw_8_scaffold_88_4
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1821..2693)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0B0A8_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KGA11006.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
EphC
sw_8_scaffold_88_5
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2745..3062
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R7R6_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK20276.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_8_scaffold_88_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3111..4043
DNA (933bp) protein (311aa)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; EC=3.5.4.27 {ECO:0000256|HAMAP-Rule:MF_00486};; Methenyl-H4MPT cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; TaxID
mch; probable methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLA1_9EURY
sw_8_scaffold_88_7
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4040..4525
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HSP4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ86788.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717
hypothetical protein
sw_8_scaffold_88_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4577..5251
DNA (675bp) protein (225aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 (EC:3.8.1.2)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYM9_9EURY
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:EMA49964.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
sw_8_scaffold_88_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5253..6215)
DNA (963bp) protein (321aa)
Protein synthesis factor GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDL9_9EURY
Protein synthesis factor GTP-binding protein {ECO:0000313|EMBL:EMA43428.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
translation elongation factor aEF-1 alpha subunit-like protein
sw_8_scaffold_88_10
unknown

Not on your lists

6217..6936
DNA (720bp) protein (240aa)

This feature has no annotations

sw_8_scaffold_88_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7180..7899)
DNA (720bp) protein (240aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01
Phosphoglycolate phosphatase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKT3_NATM8
sw_8_scaffold_88_12
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7950..8447)
DNA (498bp) protein (166aa)
Chaperone protein dnaJ n=2 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R7S0_HALMT
dnaJ; chaperone protein dnaJ
Chaperone protein dnaJ {ECO:0000313|EMBL:AFK20280.1}; Molecular chaperone DnaJ {ECO:0000313|EMBL:AHZ23649.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
sw_8_scaffold_88_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8570..8773
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J0Z1_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01390.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_8_scaffold_88_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8824..9642)
DNA (819bp) protein (273aa)
pyrF; orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000255|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000255|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000255|HAMAP-Rule:MF_01215}; Short=OMPDCase {ECO:0000255
Orotidine 5'-phosphate decarboxylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PYRF_NATPD
sw_8_scaffold_88_15
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9954..10625
DNA (672bp) protein (224aa)
Putative hydrolase of the HAD superfamily protein n=3 Tax=Haloferax RepID=M0F7C7_9EURY
Putative hydrolase of the HAD superfamily protein {ECO:0000313|EMBL:ELZ55870.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofe
haloacid dehalogenase
sw_8_scaffold_88_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10637..11170)
DNA (534bp) protein (178aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=797209 species="Arc
ipp; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QS08_9EURY
sw_8_scaffold_88_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11350..11700
DNA (351bp) protein (117aa)
Transcription regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHG6_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ22740.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
putative transcriptional regulator
sw_8_scaffold_88_18
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11716..12417)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZWM5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY90900.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
sw_8_scaffold_88_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12407..13270)
DNA (864bp) protein (288aa)
rnhA2; ribonuclease H, type 1 (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0ND61_9EURY
Ribonuclease H {ECO:0000313|EMBL:EMA54615.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;
sw_8_scaffold_88_20
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13558..13911
DNA (354bp) protein (118aa)
Transcription initiation factor IIB n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MFQ5_HALMO
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
Transcription factor TFIIB cyclin-related
sw_8_scaffold_88_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13949..14368
DNA (420bp) protein (140aa)
Oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N840_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA53743.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Rieske iron sulfur protein
sw_8_scaffold_88_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14369..15268)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INE6_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50357.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_8_scaffold_88_23
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15731..16855
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IFG9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR50362.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_8_scaffold_88_24
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17312..17923)
DNA (612bp) protein (204aa)
Na+/proline symporter n=1 Tax=Halogranum salarium B-1 RepID=J3A238_9EURY
Na+/proline symporter {ECO:0000313|EMBL:EJN59393.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
panF; pantothenate permease
sw_8_scaffold_88_25
unknown

Not on your lists

comp(18511..19122)
DNA (612bp) protein (204aa)

This feature has no annotations

sw_8_scaffold_88_26
unknown

Not on your lists

19798..19950
DNA (153bp) protein (51aa)

This feature has no annotations

sw_8_scaffold_88_27
unknown

Not on your lists

comp(19983..20315)
DNA (333bp) protein (111aa)

This feature has no annotations

sw_8_scaffold_88_28
unknown

Not on your lists

comp(20305..20457)
DNA (153bp) protein (51aa)

This feature has no annotations

sw_8_scaffold_88_29
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21054..22130)
DNA (1077bp) protein (359aa)
Phage integrase family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAP7_HALJB
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ADJ14769.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus
Displaying items 1-30 of 75 in total

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