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sw_8_scaffold_1013

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1013_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..253
DNA (252bp) protein (84aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Pas domain s-box n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML44_9EURY
Pas domain s-box {ECO:0000313|EMBL:EMA46083.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
sw_8_scaffold_1013_2
unknown

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501..737
DNA (237bp) protein (79aa)

This feature has no annotations

sw_8_scaffold_1013_3
unknown

Not on your lists

905..1762
DNA (858bp) protein (286aa)

This feature has no annotations

sw_8_scaffold_1013_4
unknown

Not on your lists

1759..2922
DNA (1164bp) protein (388aa)

This feature has no annotations

sw_8_scaffold_1013_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3209..3607)
DNA (399bp) protein (133aa)
udp_2; uridine phosphorylase 2 (EC:2.4.2.3)
Uridine phosphorylase {ECO:0000313|EMBL:CAI49681.1}; EC=2.4.2.3 {ECO:0000313|EMBL:CAI49681.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Uridine phosphorylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQB5_NATPD
sw_8_scaffold_1013_6
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3728..4006)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BNX3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ12545.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
sw_8_scaffold_1013_7
unknown

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4134..4580
DNA (447bp) protein (149aa)

This feature has no annotations

sw_8_scaffold_1013_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5053..5982
DNA (930bp) protein (310aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206, ECO:0000313|EMBL:ELZ31092.1};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO
Probable lipoyl synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D8S7_9EURY
lipoyl synthase
sw_8_scaffold_1013_9

Not on your lists

comp(6199..6657)
DNA (459bp) protein (153aa)
GMP synthase-glutamine amidotransferase domain protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4X7N2_9ARCH
GMP synthase-glutamine amidotransferase domain protein {ECO:0000313|EMBL:ESS03684.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
GMP synthase family protein
sw_8_scaffold_1013_10
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6991..8121
DNA (1131bp) protein (377aa)
Pyruvate dehydrogenase E1 component, alpha subunit n=1 Tax=Natronococcus occultus SP4 RepID=L0K2L2_9EURY
pyruvate dehydrogenase E1 component, alpha subunit
Pyruvate dehydrogenase E1 component, alpha subunit {ECO:0000313|EMBL:AGB39547.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natr
sw_8_scaffold_1013_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8126..9124
DNA (999bp) protein (333aa)
Transketolase central region n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N015_9EURY
Transketolase central region {ECO:0000313|EMBL:EMA49990.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
sw_8_scaffold_1013_12

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9127..10791
DNA (1665bp) protein (555aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0S8_9ARCH
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component {ECO:0000313|EMBL:ESS04527.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="unculture
branched-chain alpha-keto acid dehydrogenase subunit E2
sw_8_scaffold_1013_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10791..12206
DNA (1416bp) protein (472aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Dihydrolipoyl dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4Q9_9EURY
dihydrolipoamide dehydrogenase
sw_8_scaffold_1013_14
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12586..13239
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3G0_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK18770.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
sw_8_scaffold_1013_15
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13244..14932)
DNA (1689bp) protein (563aa)
Ammonium transporter n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C732_9EURY
Ammonium transporter {ECO:0000313|EMBL:ELZ19010.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.
ammonia permease
sw_8_scaffold_1013_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15308..16699)
DNA (1392bp) protein (464aa)
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1B2_HALMD
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit {ECO:0000313|EMBL:ACV47120.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobi
sw_8_scaffold_1013_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16761..17225)
DNA (465bp) protein (155aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=halophilic archaeon J07HX64 RepID=U1QTR1_9EURY
hisH; imidazole glycerol phosphate synthase subunit HisH
sw_8_scaffold_1013_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17514..18476)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3ETK0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57497.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
cation diffusion facilitator family transporter
sw_8_scaffold_1013_19
unknown

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18679..18846
DNA (168bp) protein (56aa)

This feature has no annotations

sw_8_scaffold_1013_20
unknown

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18843..19016
DNA (174bp) protein (58aa)

This feature has no annotations

sw_8_scaffold_1013_21
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19023..19322)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KQ14_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDS91005.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_8_scaffold_1013_22
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19617..19862
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P5Z6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64265.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_8_scaffold_1013_23
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19946..20965)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W2P2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00062.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_8_scaffold_1013_24
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20958..21155)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W5Y7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00063.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_8_scaffold_1013_25

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comp(21236..22258)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MLI0_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05729.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_8_scaffold_1013_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22691..23542
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDI3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ19929.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
signal transduction protein with CBS domains
sw_8_scaffold_1013_27
unknown

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23839..23970
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 27 items

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