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sw_8_scaffold_1055

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1055_1
Coccomyxa subellipsoidea, Coccomyxa, Trebouxiophyceae, Chlorophyta, Viridiplantae

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1..972
DNA (972bp) protein (324aa)
Flagellar associated protein n=1 Tax=Coccomyxa subellipsoidea C-169 RepID=I0Z6Q0_9CHLO
Obg-like ATPase 1 {ECO:0000256|HAMAP-Rule:MF_03167}; TaxID=574566 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa.;" source="Coccomyxa subellipsoidea C-169.;
GTP-dependent nucleic acid-binding protein EngD
sw_8_scaffold_1055_2
unknown

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comp(1316..2965)
DNA (1650bp) protein (550aa)

This feature has no annotations

sw_8_scaffold_1055_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3123..3755)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QU75_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10833.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_8_scaffold_1055_4
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3814..4914)
DNA (1101bp) protein (367aa)
ABC transporter n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XCZ2_9EURY
ABC transporter {ECO:0000313|EMBL:ELY59487.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.;
spermidine/putrescine ABC transporter ATPase
sw_8_scaffold_1055_5
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4919..5707)
DNA (789bp) protein (263aa)
NifC-like ABC-type porter n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AKI5_NATGS
NifC-like ABC-type transporterporter
NifC-like ABC-type porter {ECO:0000313|EMBL:AFZ73560.1}; Flags: Precursor;; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natrono
sw_8_scaffold_1055_6
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5704..6027)
DNA (324bp) protein (108aa)
Molybdate ABC transporter periplasmic protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BZX2_9EURY
Molybdate ABC transporter periplasmic protein {ECO:0000313|EMBL:ELZ16551.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterr
molybdate ABC transporter periplasmic protein
sw_8_scaffold_1055_7

Not on your lists

comp(5979..6623)
DNA (645bp) protein (215aa)
Tungstate/molybdate binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XR64_9ARCH
Tungstate/molybdate binding protein {ECO:0000313|EMBL:ESS02536.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
ABC-type molybdate transport system, periplasmic component
sw_8_scaffold_1055_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6689..7423
DNA (735bp) protein (245aa)
Molybdenum-pterin binding domain protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZL5_9EURY
Molybdenum-pterin binding domain protein {ECO:0000313|EMBL:ERH09730.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ModE family transcriptional regulator
sw_8_scaffold_1055_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7448..8086)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LX88_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38197.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_8_scaffold_1055_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8171..8914)
DNA (744bp) protein (248aa)
Proliferating cell nuclear antigen, PCNA; K04802 proliferating cell nuclear antigen id=24647874 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1085028 species="Arch
Proliferating cell nuclear antigen, PCNA
sw_8_scaffold_1055_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9049..9456
DNA (408bp) protein (136aa)
Nascent polypeptide-associated complex protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1P1U9_9EURY
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
nac; nascent polypeptide-associated complex protein
sw_8_scaffold_1055_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9759..10106
DNA (348bp) protein (116aa)
Methyltransferase small n=1 Tax=Halogranum salarium B-1 RepID=J3JI18_9EURY
Methyltransferase small {ECO:0000313|EMBL:EJN61466.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
pimT2; protein-L-isoaspartate methyltransferase-like protein
sw_8_scaffold_1055_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10121..10738)
DNA (618bp) protein (206aa)
hypothetical protein id=24645511 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09724.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_8_scaffold_1055_14

Not on your lists

comp(10745..11065)
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A
DNA-directed RNA polymerase, subunit M n=1 Tax=uncultured archaeon A07HN63 RepID=V4XII2_9ARCH
transcription termination factor Tfs
sw_8_scaffold_1055_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11227..12237)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLH5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22734.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_8_scaffold_1055_16
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12554..12847
DNA (294bp) protein (98aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V525_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA22073.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_8_scaffold_1055_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12956..13813
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037392FD
Uncharacterized protein {ECO:0000313|EMBL:ELZ22744.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
conserved hypothetical protein (DUF650)
Displaying 17 items

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