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sw_8_scaffold_1172

Search features with annotation key words

Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1172_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2..112)
DNA (111bp) protein (37aa)
Uncharacterized conserved protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NKW9_HALBP
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ADQ67121.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY29669.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
sw_8_scaffold_1172_2
unknown

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comp(277..399)
DNA (123bp) protein (41aa)

This feature has no annotations

sw_8_scaffold_1172_trna_1
unknown

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comp(456..540)
DNA (85bp)
transferRNA
sw_8_scaffold_1172_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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595..930
DNA (336bp) protein (112aa)
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIY9_9EURY
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB {ECO:0000313|EMBL:ERH10074.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;
tfbA_4; transcription initiation factor TFB 4
sw_8_scaffold_1172_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(931..1443)
DNA (513bp) protein (171aa)
Cytidyltransferase-related domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRF3_HALUD
phosphopantetheine adenylyltransferase
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:ACV10590.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
sw_8_scaffold_1172_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1492..2112)
DNA (621bp) protein (207aa)
Transcriptional regulator, TrmB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB9_HALMD
TrmB family transcriptional regulator
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ACV48353.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_8_scaffold_1172_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2187..3491)
DNA (1305bp) protein (435aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1085028 species="Archaea; Euryarchaeota; Halo
DNA polymerase IV n=1 Tax=halophilic archaeon J07HX64 RepID=U1QR25_9EURY
DNA polymerase IV
sw_8_scaffold_1172_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3867..4541
DNA (675bp) protein (225aa)
Uncharacterized protein id=24644395 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH08620.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_8_scaffold_1172_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4610..5002)
DNA (393bp) protein (131aa)
DUF35 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSS5_NATM8
DUF35 family protein
DUF35 family protein {ECO:0000313|EMBL:CCQ37443.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (str
sw_8_scaffold_1172_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4999..6168)
DNA (1170bp) protein (390aa)
acaB2; acetyl-CoA C-acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:CCQ37444.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CCQ37444.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Acetyl-CoA C-acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLC0_NATM8
sw_8_scaffold_1172_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6162..6905)
DNA (744bp) protein (248aa)
3-oxoacyl-ACP reductase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LEA2_HALJP
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EMA30300.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
3-ketoacyl-ACP reductase
sw_8_scaffold_1172_11
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7109..7588)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BE39_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09090.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
conserved hypothetical protein (DUF309)
Displaying 12 items

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