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sw_8_scaffold_1230

Search features with annotation key words

Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_1230_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..969
DNA (969bp) protein (323aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
DNA polymerase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LKZ0_HALJP
DNA polymerase
sw_8_scaffold_1230_2
unknown

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972..1223
DNA (252bp) protein (84aa)

This feature has no annotations

sw_8_scaffold_1230_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1216..1839
DNA (624bp) protein (208aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
DNA polymerase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRZ0_9EURY
DNA polymerase B exonuclease
sw_8_scaffold_1230_4
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1856..2860)
DNA (1005bp) protein (335aa)
ABC transporter permease n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LV69_9EURY
ABC transporter permease {ECO:0000313|EMBL:ELY43008.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.
dppB3; dipeptide/oligopeptide/nickel ABC transporter permease
sw_8_scaffold_1230_5
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3053..4294
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003736B64
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:ELZ59958.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
binding-protein-dependent transport system inner membrane protein
sw_8_scaffold_1230_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4291..5337
DNA (1047bp) protein (349aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FMZ6_9EURY
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:ELZ59959.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
dppD3; dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein
sw_8_scaffold_1230_7
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5649..5978)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H819_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ80681.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hypothetical protein
sw_8_scaffold_1230_8
unknown

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comp(5981..6124)
DNA (144bp) protein (48aa)

This feature has no annotations

sw_8_scaffold_1230_9
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6242..6505
DNA (264bp) protein (88aa)
Peptide ABC transporter ATPase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W159_9EURY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:ELY43011.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense
sw_8_scaffold_1230_10
unknown

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comp(6688..7332)
DNA (645bp) protein (215aa)

This feature has no annotations

sw_8_scaffold_1230_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7664..8542
DNA (879bp) protein (293aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERJ07647.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ERJ07647.1};; Iron-sulfur cluster assembly ATPase protein SufC {ECO:0000313|EMBL:CCQ32696.1}; TaxID=103
ABC transporter ATP-binding protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PMU0_9EURY
sufC; iron-sulfur cluster assembly ATPase protein SufC
Displaying 11 items

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