ggKbase home page

sw_8_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 46 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_183_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..977)
DNA (975bp) protein (325aa)
Threonine aldolase (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MJL8_9EURY
Threonine aldolase {ECO:0000313|EMBL:ERG89684.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
Threonine aldolase
sw_8_scaffold_183_2
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1105..2103
DNA (999bp) protein (333aa)
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AEZ0_NATGS
F420-dependent methylene-tetrahydromethanopterin reductase
Flavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:AFZ72483.1}; Luciferase-like protein {ECO:0000313|EMBL:ELY74355.1}; TaxID=797304 species="
sw_8_scaffold_183_3
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2419..3495)
DNA (1077bp) protein (359aa)
Sugar ABC transporter permease n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I137_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:ELZ89104.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis AT
tsgC12; sugar ABC transporter permease
sw_8_scaffold_183_4
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3492..4622)
DNA (1131bp) protein (377aa)
Inner-membrane translocator n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NIH6_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:EMA57358.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 135
inner-membrane translocator
sw_8_scaffold_183_5
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4615..6183)
DNA (1569bp) protein (523aa)
ABC transporter n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L5V6_9EURY
ABC transporter {ECO:0000313|EMBL:EMA28468.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
ABC transporter
sw_8_scaffold_183_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6220..7350)
DNA (1131bp) protein (377aa)
Putative sugar ABC transporter periplasmic substrate-binding protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5I6_HALJP
Putative sugar ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:EMA27699.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
basic membrane lipoprotein
sw_8_scaffold_183_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7449..8669
DNA (1221bp) protein (407aa)
Selenocysteine synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUI9_9EURY
Selenocysteine synthase {ECO:0000313|EMBL:ELZ26910.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
selenocysteine synthase
sw_8_scaffold_183_8
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8713..9738
DNA (1026bp) protein (342aa)
Glucose 1-dehydrogenase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7U6_9EURY
theronine dehydrogenase-like Zn-dependent dehydrogenase
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:AGN00089.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source
sw_8_scaffold_183_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9739..11022)
DNA (1284bp) protein (428aa)
Oxidoreductase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ69_HALMD
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACV46755.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_8_scaffold_183_10
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11137..12465)
DNA (1329bp) protein (443aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Natronococcus occultus SP4 RepID=L0K2S8_9EURY
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:AGB38840.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
sw_8_scaffold_183_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12557..12760
DNA (204bp) protein (68aa)
Putative transcriptional regulator n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PGJ4_9EURY
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CCC40980.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain DSM
sw_8_scaffold_183_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12874..13665
DNA (792bp) protein (264aa)
2,5-didehydrogluconate reductase (EC:1.1.1.274)
2,5-didehydrogluconate reductase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HI89_9EURY
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:ESP87634.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidat
sw_8_scaffold_183_13
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13757..14731
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BL22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ11581.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
hypothetical protein
sw_8_scaffold_183_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15020..15607
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036D70AF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48141.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_183_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15640..16032)
DNA (393bp) protein (131aa)
metal-binding protein id=24654142 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Putative metal-binding protein {ECO:0000313|EMBL:ERH08491.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
zinc finger SWIM domain-containing protein
sw_8_scaffold_183_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16117..16776
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZL41_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61455.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative O-methyltransferase
sw_8_scaffold_183_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16810..17190)
DNA (381bp) protein (127aa)
odc; ornithine decarboxylase (EC:4.1.1.17 4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK15_9EURY
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
sw_8_scaffold_183_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17202..17966)
DNA (765bp) protein (255aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] id=24648995 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
diaminopimelate decarboxylase
sw_8_scaffold_183_19
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18363..19436
DNA (1074bp) protein (358aa)
Cell division protein FtsZ n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2FCM8_9EURY
Cell division protein FtsZ {ECO:0000256|RuleBase:RU003360}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
Tubulin/FtsZ GTPase
sw_8_scaffold_183_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19458..20804)
DNA (1347bp) protein (449aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1S6_HALMD
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACV49166.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sourc
sw_8_scaffold_183_21
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21293..22342
DNA (1050bp) protein (350aa)
Cellulase M related protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MHU3_9EURY
Cellulase M related protein {ECO:0000313|EMBL:ERG88889.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
peptidase
sw_8_scaffold_183_22
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22536..23336)
DNA (801bp) protein (267aa)
MOSC domain-containing protein beta barrel domain-containing protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VNJ3_9EURY
molybdenum cofactor biosysynthesis protein
Molybdenum cofactor biosysynthesis protein {ECO:0000313|EMBL:AHF99351.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnic
sw_8_scaffold_183_trna_2
unknown

Not on your lists

comp(23931..24065)
DNA (135bp)
transferRNA
sw_8_scaffold_183_23
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24268..24456)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NT98_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10820.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_8_scaffold_183_24
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24574..25386
DNA (813bp) protein (271aa)
imidazole glycerol phosphate synthase subunit HisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W070_9EURY
sw_8_scaffold_183_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25514..26350
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037F47BD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48075.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_183_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26397..26681)
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit L n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4Q2_HALMD
RNA polymerase dimerisation
sw_8_scaffold_183_trna_1
unknown

Not on your lists

26797..26867
DNA (71bp)
transferRNA
sw_8_scaffold_183_27
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26959..27462)
DNA (504bp) protein (168aa)
Uncharacterized protein id=24648787 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09919.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_8_scaffold_183_28
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27831..28112
DNA (282bp) protein (94aa)
rpl44e; 50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e id=24649688 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl44e; 50S ribosomal protein L44e
Displaying items 1-30 of 46 in total

View Taxonomy