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sw_8_scaffold_2013

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_2013_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..780)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PJH5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10606.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_8_scaffold_2013_2
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(895..1722)
DNA (828bp) protein (276aa)
Aldehyde reductase n=2 Tax=Haloarcula RepID=Q5V663_HALMA
yafB; aldehyde reductase
Aldehyde reductase {ECO:0000313|EMBL:AAV44989.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain AT
sw_8_scaffold_2013_3
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1903..2385)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DBE7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32057.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
sw_8_scaffold_2013_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2589..3320)
DNA (732bp) protein (244aa)
pcm2; protein-L-isoaspartate O-methyltransferase 2 (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] id=24655203 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Protein-L-isoaspartate carboxylmethyltransferase {ECO:0000313|EMBL:ERG88715.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
protein-L-isoaspartate(D-aspartate) O-methyltransferase
sw_8_scaffold_2013_5

Not on your lists

3422..3628
DNA (207bp) protein (69aa)
Heavy metal transport/detoxification protein n=2 Tax=Archaea RepID=B9LW18_HALLT
Heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:AEN07701.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_8_scaffold_2013_6
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4502..5068
DNA (567bp) protein (189aa)
DNA-binding protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00037D23BC
Response regulator receiver protein {ECO:0000313|EMBL:ELZ49256.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense
response regulator receiver protein
sw_8_scaffold_2013_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5461..6807
DNA (1347bp) protein (449aa)
Ribonuclease J {ECO:0000256|HAMAP-Rule:MF_01492}; Short=RNase J {ECO:0000256|HAMAP-Rule:MF_01492};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01492};; TaxID=797114 species="Archaea; Euryarchaeota; Halobac
Beta-lactamase domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT69_9EURY
putative hydrolase of the metallo-beta-lactamase superfamily
sw_8_scaffold_2013_8
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6812..7846
DNA (1035bp) protein (345aa)
polyprenyl synthetase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] id=24655940 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:ERG89313.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
polyprenyl synthetase
sw_8_scaffold_2013_9
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8200..8643
DNA (444bp) protein (148aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SR94_NATMM
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADD06650.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATC
sw_8_scaffold_2013_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8718..8996)
DNA (279bp) protein (93aa)
Putative metal-binding protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MXE7_9EURY
Putative metal-binding protein {ECO:0000313|EMBL:ERG88668.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_8_scaffold_2013_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9230..9445)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P544_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG88667.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
surface glycoprotein precursor
sw_8_scaffold_2013_12
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9640..10998
DNA (1359bp) protein (453aa)
Menaquinone-specific isochorismate synthase n=2 Tax=Haloarcula RepID=M0JS89_9EURY
Menaquinone-specific isochorismate synthase {ECO:0000313|EMBL:EMA12002.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
isochorismate synthase
sw_8_scaffold_2013_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10995..12290
DNA (1296bp) protein (432aa)
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC:4.2.99.20)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYV4_HALMD
sw_8_scaffold_2013_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12287..12736
DNA (450bp) protein (150aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2U7_HALJB
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
sw_8_scaffold_2013_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12752..13735)
DNA (984bp) protein (328aa)
Molecular chaperone DnaJ n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J0N6_HALVA
Molecular chaperone DnaJ {ECO:0000313|EMBL:EMA01913.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATC
heat shock protein DnaJ domain-containing protein
sw_8_scaffold_2013_16
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13931..15199
DNA (1269bp) protein (423aa)
Acyl-CoA dehydrogenase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W2U9_9EURY
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGN00162.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;
sw_8_scaffold_2013_17
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15273..15767
DNA (495bp) protein (165aa)
GCN5-related N-acetyltransferase n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7CTF2_NATSJ
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AFO55936.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2
sw_8_scaffold_2013_18
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15760..16446)
DNA (687bp) protein (229aa)
ABC-2 type transporter n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BEB8_9EURY
ABC-2 type transporter {ECO:0000313|EMBL:ELZ09180.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans DS
ABC-2 type transporter
Displaying 18 items

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