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sw_8_scaffold_2485

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_2485_1
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..145)
DNA (144bp) protein (48aa)
Bifunctional protein FolD n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BZP0_9EURY
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM
sw_8_scaffold_2485_2
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(142..1818)
DNA (1677bp) protein (559aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYX3_HALVA
sw_8_scaffold_2485_3
unknown

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comp(2014..2169)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_8_scaffold_2485_4
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2243..2923)
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=V5TNH2_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB66094.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_8_scaffold_2485_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2907..3488)
DNA (582bp) protein (194aa)
HoxA-like transcriptional regulator n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KTR9_HALAR
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AHB66093.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
sw_8_scaffold_2485_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3617..4198
DNA (582bp) protein (194aa)
beta-lactamase domain-containing protein id=24646942 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Zn-dependent hydrolase {ECO:0000313|EMBL:ERH11106.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
flavoprotein
sw_8_scaffold_2485_trna_1
unknown

Not on your lists

4288..4362
DNA (75bp)
transferRNA
sw_8_scaffold_2485_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4771..5046
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PKZ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG90065.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_8_scaffold_2485_8
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5046..5372
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PQ36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA72066.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein
sw_8_scaffold_2485_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5658..6170)
DNA (513bp) protein (171aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMT9_HALUD
SUF system FeS assembly protein, NifU family
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:ACV11402.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorh
sw_8_scaffold_2485_trna_2
unknown

Not on your lists

6368..6473
DNA (106bp)
transferRNA
sw_8_scaffold_2485_10
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6598..7545)
DNA (948bp) protein (316aa)
serA2; phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0I6K1_9EURY
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ELZ91039.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis AT
sw_8_scaffold_2485_11
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7762..8031)
DNA (270bp) protein (90aa)
TATA-box-binding protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQF6_9EURY
transcription factor
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
sw_8_scaffold_2485_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8072..8980
DNA (909bp) protein (303aa)
RNA methylase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K0X5_9EURY
RNA methylase {ECO:0000313|EMBL:EMA14433.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;"
putative RNA methylase
Displaying 14 items

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