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sw_8_scaffold_2661

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_2661_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(61..186)
DNA (126bp) protein (42aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH10278.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_8_scaffold_2661_2
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(265..681)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A254_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD51739.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
sw_8_scaffold_2661_3
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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967..3087
DNA (2121bp) protein (707aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000368E980
thioredoxin domain containing protein
Thioredoxin domain containing protein {ECO:0000313|EMBL:AJF27218.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp
sw_8_scaffold_2661_trna_1
unknown

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3274..3354
DNA (81bp)
transferRNA
sw_8_scaffold_2661_4

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comp(3661..4110)
DNA (450bp) protein (150aa)
Putative nucleic acid-binding protein, contains PIN domain protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y8L0_9ARCH
Putative nucleic acid-binding protein, contains PIN domain protein {ECO:0000313|EMBL:ESS09131.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
PilT domain protein
sw_8_scaffold_2661_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4107..4454)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0A8_NATM8
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CCQ35876.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
sw_8_scaffold_2661_6
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4613..5386)
DNA (774bp) protein (258aa)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JC16_9EURY
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EMA05913.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
alpha/beta hydrolase fold protein
sw_8_scaffold_2661_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5390..6454)
DNA (1065bp) protein (355aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PDY4_9EURY
Suspect SCG annotation. See neighboring gene [sw_8_scaffold_2661_8].
sw_8_scaffold_2661_8
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6451..8100)
DNA (1650bp) protein (550aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RSW0_HALTV
sw_8_scaffold_2661_9
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8255..9118
DNA (864bp) protein (288aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157 1.1.1.35)
3-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Halorubrum distributum RepID=M0EQ04_9EURY
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ49158.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distribut
sw_8_scaffold_2661_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9180..9728
DNA (549bp) protein (183aa)
Methyltransferase type 11 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4R4_HALJB
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADJ15531.1}; Type 11 methyltransferase {ECO:0000313|EMBL:ELY36060.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
sw_8_scaffold_2661_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9784..10419
DNA (636bp) protein (212aa)
Putative RNA methylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPU7_9EURY
Putative RNA methylase {ECO:0000313|EMBL:ELZ24412.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
RNA methyltransferase
sw_8_scaffold_2661_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10449..11123)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6G9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29759.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
Displaying 13 items

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