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sw_8_scaffold_319

Search features with annotation key words

Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_319_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(84..1061)
DNA (978bp) protein (326aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBZ8_HALJP
flap endonuclease-1
sw_8_scaffold_319_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1168..1998
DNA (831bp) protein (277aa)
hypothetical protein id=24647862 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08991.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_8_scaffold_319_3
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2028..2558)
DNA (531bp) protein (177aa)
acetyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI000365215F
N-acetyltransferase GCN5 {ECO:0000313|EMBL:AKH97574.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum s
N-acetyltransferase GCN5
sw_8_scaffold_319_4
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2713..2916)
DNA (204bp) protein (68aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V5T4_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45118.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_8_scaffold_319_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3106..4107
DNA (1002bp) protein (334aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:ERH09736.1}; EC=4.3.1.12 {ECO:0000313|EMBL:ERH09736.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic a
Ornithine cyclodeaminase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PH32_9EURY
Ornithine cyclodeaminase
sw_8_scaffold_319_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4109..5239)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27426.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_8_scaffold_319_7
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5311..5535)
DNA (225bp) protein (75aa)
H/ACA RNA-protein complex component Gar1 n=2 Tax=Haloferax RepID=M0HIF0_9EURY
H/ACA RNA-protein complex component Gar1 {ECO:0000313|EMBL:ELZ85712.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elong
gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1
sw_8_scaffold_319_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5532..5810)
DNA (279bp) protein (93aa)
Signal recognition particle 19 kDa protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SRP19_NATPD
srp19; signal recognition particle 19K protein
Signal recognition particle 19 kDa protein {ECO:0000255|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000255|HAMAP-Rule:MF_00305};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
sw_8_scaffold_319_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5872..6204
DNA (333bp) protein (111aa)
hypothetical protein id=24648994 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10129.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_8_scaffold_319_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6341..7150)
DNA (810bp) protein (270aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE92_9EURY
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
sw_8_scaffold_319_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7215..8045)
DNA (831bp) protein (277aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LKU6_HALJP
sw_8_scaffold_319_12
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8042..9304)
DNA (1263bp) protein (421aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Tryptophan synthase beta chain n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJ87_HALJP
tryptophan synthase subunit beta
sw_8_scaffold_319_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9301..10068)
DNA (768bp) protein (256aa)
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134};; TaxID=348780 species="Archaea; Eu
Indole-3-glycerol phosphate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQC2_NATPD
sw_8_scaffold_319_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10116..10784)
DNA (669bp) protein (223aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIX9_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERH10064.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
methyltransferase type 11
sw_8_scaffold_319_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11104..11568
DNA (465bp) protein (155aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CC53_9EURY
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:ELZ20213.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
methylated-DNA--cysteine S-methyltransferase
sw_8_scaffold_319_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11819..12067)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:CAI49223.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_8_scaffold_319_17
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12214..12921
DNA (708bp) protein (236aa)
Uncharacterized protein (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MWS4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG88423.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_8_scaffold_319_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12967..14586
DNA (1620bp) protein (540aa)
sensor box histidine kinase (EC:2.7.13.3)
Sensor box histidine kinase {ECO:0000313|EMBL:CCQ37525.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CCQ37525.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSZ3_NATM8
sw_8_scaffold_319_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14733..15398)
DNA (666bp) protein (222aa)
Homolog to cytochrome c-type biogenesis protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISJ1_NATPD
cytochrome c-type biogenesis protein
Homolog to cytochrome c-type biogenesis protein CcdA {ECO:0000313|EMBL:CAI48895.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sourc
sw_8_scaffold_319_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15526..16056)
DNA (531bp) protein (177aa)
Thioredoxin n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISJ2_NATPD
trx_2; thioredoxin 2
Thioredoxin {ECO:0000313|EMBL:CAI48894.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 35
sw_8_scaffold_319_21
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16058..16789)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0L2M0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA27343.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
sw_8_scaffold_319_22
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16962..17984)
DNA (1023bp) protein (341aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=24654040 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
slyD; peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_8_scaffold_319_23
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18129..18704
DNA (576bp) protein (192aa)
Adenylyl cyclase CyaB n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NS94_HALUD
adenylyl cyclase CyaB
Adenylyl cyclase CyaB {ECO:0000313|EMBL:ACV10701.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain
sw_8_scaffold_319_24
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18790..19995
DNA (1206bp) protein (402aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00136}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00136};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00136};; Methionine adenosyltransferase
S-adenosylmethionine synthetase n=1 Tax=Halomicrobium katesii RepID=UPI000377FF08
sw_8_scaffold_319_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20001..21185
DNA (1185bp) protein (395aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiam
Probable tRNA sulfurtransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRK3_9EURY
thiamine biosynthesis protein
sw_8_scaffold_319_26
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21209..21967)
DNA (759bp) protein (253aa)
Amidohydrolase 2 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K825_9EURY
hypothetical protein
Amidohydrolase 2 {ECO:0000313|EMBL:EMA16968.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13557.;
sw_8_scaffold_319_27
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22106..23689
DNA (1584bp) protein (528aa)
chaperonin Cpn60/TCP-1 id=24647732 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Thermosome subunit {ECO:0000313|EMBL:ERH08864.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
chaperonin Cpn60/TCP-1
sw_8_scaffold_319_28

Not on your lists

23788..24108
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YFP5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11936.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_8_scaffold_319_29
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24144..24827)
DNA (684bp) protein (228aa)
probable S-adenosylmethionine-dependent methyltransferase (homolog to 24-sterol C-methyltransferase) (EC:2.1.1.-)
Probable S-adenosylmethionine-dependent methyltransferase (Homolog to 24-sterol C-methyltransferase) {ECO:0000313|EMBL:CCQ35737.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCQ35737.1};; TaxID=268739 species="Arc
Probable S-adenosylmethionine-dependent methyltransferase (Homolog to 24-sterol C-methyltransferase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP07_NATM8
sw_8_scaffold_319_30
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24869..25858)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50081.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
conserved hypothetical membrane protein (DUF369)
Displaying items 1-30 of 34 in total

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