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sw_8_scaffold_430

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_430_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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168..302
DNA (135bp) protein (45aa)
DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=485914 species="Archaea; Euryarchaeo
DNA topoisomerase I n=1 Tax=Halomicrobium katesii RepID=UPI00037E2626
sw_8_scaffold_430_2
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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458..1228
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UYB3_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV47740.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_8_scaffold_430_3
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1192..1983)
DNA (792bp) protein (264aa)
methyltransferase (EC:2.1.1.-)
Type 11 methyltransferase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WYK1_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELY54534.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus D
sw_8_scaffold_430_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2015..3493)
DNA (1479bp) protein (493aa)
aspartyl-tRNA(Asn) amidotransferase subunit B / alutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.3.5.- 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNB6_9EURY
sw_8_scaffold_430_5
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3493..4551)
DNA (1059bp) protein (353aa)
fdfT; farnesyl-diphosphate farnesyltransferase/Squalene/phytoene synthase (EC:2.5.1.21)
Farnesyl-diphosphate farnesyltransferase n=2 Tax=Haloarcula hispanica RepID=V5TP99_HALHI
Farnesyl-diphosphate farnesyltransferase/Squalene/phytoene synthase {ECO:0000313|EMBL:EMA18085.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloa
sw_8_scaffold_430_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4698..5903
DNA (1206bp) protein (402aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWR0_HALMD
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACV48270.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
sw_8_scaffold_430_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6050..7945
DNA (1896bp) protein (632aa)
korA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
Pyruvate:ferredoxin oxidoreductase related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit n=1 Tax=halophilic archaeon J07HX64 RepID=U1QXN8_9EURY
Pyruvate:ferredoxin oxidoreductase related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit {ECO:0000313|EMBL:ERH10692.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
sw_8_scaffold_430_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7962..8900
DNA (939bp) protein (313aa)
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family n=1 Tax=halophilic archaeon J07HX64 RepID=U1PJP4_9EURY
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family {ECO:0000313|EMBL:ERH10691.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
sw_8_scaffold_430_9
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9031..9459
DNA (429bp) protein (143aa)
HTH-type transcriptional regulator Ptr2 n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YUB6_9EURY
HTH-type transcriptional regulator Ptr2 {ECO:0000313|EMBL:GAD52312.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
Lrp/AsnC family transcription regulator
sw_8_scaffold_430_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9532..11109
DNA (1578bp) protein (526aa)
DHH family phosphoesterase n=1 Tax=Halomicrobium katesii RepID=UPI00038128FA
phosphoesterase RecJ domain-containing protein
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:ACV48276.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_8_scaffold_430_11
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11148..11939
DNA (792bp) protein (264aa)
CBS domain containing protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CN86_9EURY
CBS domain containing protein {ECO:0000313|EMBL:ELZ24696.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola J
CBS domain-containing protein
sw_8_scaffold_430_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12001..13701
DNA (1701bp) protein (567aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ACV48278.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACV48278.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
methylmalonyl-CoA mutase n=1 Tax=Halomicrobium katesii RepID=UPI000378AD90
sw_8_scaffold_430_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13779..13976
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D5T7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29494.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_8_scaffold_430_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13966..14262
DNA (297bp) protein (99aa)
Plasmid stabilization system n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3U6_9EURY
Plasmid stabilization system {ECO:0000313|EMBL:ELZ29493.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
plasmid stabilization system
sw_8_scaffold_430_trna_1
unknown

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comp(14304..14378)
DNA (75bp)
transferRNA
sw_8_scaffold_430_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14645..15094
DNA (450bp) protein (150aa)
TrkA-N domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3M4_NATM8
trkA5; TrkA-N domain protein
TrkA-N domain protein {ECO:0000313|EMBL:CCQ37121.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_8_scaffold_430_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15119..15418)
DNA (300bp) protein (100aa)
DNA-binding protein n=1 Tax=Halomicrobium katesii RepID=UPI000362259D
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACV46564.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
sw_8_scaffold_430_17
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15432..15869)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XN34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY62043.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_8_scaffold_430_18
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15940..16680
DNA (741bp) protein (247aa)
Putative membrane-bound metal-dependent hydrolase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NM59_HALUD
membrane-bound metal-dependent hydrolase
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:ACV11267.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="H
sw_8_scaffold_430_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16694..16981)
DNA (288bp) protein (96aa)
transposase, IS605 OrfB family, central region id=24646340 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:ERH10522.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
IS1341-type transposase
sw_8_scaffold_430_20
unknown

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comp(17037..17129)
DNA (93bp) protein (31aa)

This feature has no annotations

sw_8_scaffold_430_21
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17291..17467
DNA (177bp) protein (59aa)
UTP-glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:AKH97432.1}; EC=2.7.7.9 {ECO:0000313|EMBL:AKH97432.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
UDP-glucose pyrophosphorylase, GalU (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] id=24632937 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
UDP-glucose pyrophosphorylase
Displaying 22 items

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