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sw_8_scaffold_523

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_523_1
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3..323
DNA (321bp) protein (107aa)
Probable cobalamin biosynthesis protein CobD n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DTM1_9EURY
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
cobalamin biosynthesis protein CobD
sw_8_scaffold_523_2
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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323..1117
DNA (795bp) protein (265aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phospha
Cobalamin synthase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMW2_HALUD
cobalamin 5'-phosphate synthase
sw_8_scaffold_523_3
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1102..1710
DNA (609bp) protein (203aa)
ispD; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (EC:2.7.7.60) id=24654843 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
GTP:adenosylcobinamide-phosphate guanylyltransferase {ECO:0000313|EMBL:ERG89785.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;
cobY; GTP:adenosylcobinamide-phosphate guanylyltransferase
sw_8_scaffold_523_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2069..2779
DNA (711bp) protein (237aa)
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D509_9EURY
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP {ECO:0000313|EMBL:ELZ30566.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Ha
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
sw_8_scaffold_523_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3336..4862)
DNA (1527bp) protein (509aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=24649877 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1085028 species="Archaea; Euryarc
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
sw_8_scaffold_523_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4873..6021)
DNA (1149bp) protein (383aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1085028 species="Archaea; Euryarc
Leucyl-tRNA synthetase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKI7_9EURY
Suspect SCG annotation. See neighboring gene [sw_8_scaffold_523_5].
leuS; leucyl-tRNA synthetase
sw_8_scaffold_523_7
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6083..6334)
DNA (252bp) protein (84aa)
Signal-transducing histidine kinase/response regulator n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E6B1_9EURY
Signal-transducing histidine kinase/response regulator {ECO:0000313|EMBL:ELZ43311.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="
multi-sensor signal transduction histidine kinase
sw_8_scaffold_523_8
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6331..6594)
DNA (264bp) protein (88aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LML3_HALLT
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACM56601.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
sw_8_scaffold_523_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6668..8782
DNA (2115bp) protein (705aa)
fibronectin-binding A domain-containing protein id=24646271 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative eukaryotic snRNP-like RNA-binding protein {ECO:0000313|EMBL:ERH10452.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
fibronectin-binding A domain-containing protein
sw_8_scaffold_523_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8864..9949
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KYH3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA25898.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_8_scaffold_523_11

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10071..11147
DNA (1077bp) protein (359aa)
aceA; isocitrate lyase (EC:4.1.3.1)
PEP phosphonomutase related enzyme n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0P7_9ARCH
PEP phosphonomutase related enzyme {ECO:0000313|EMBL:ESS04497.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_8_scaffold_523_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11257..12561
DNA (1305bp) protein (435aa)
aceB; malate synthase (EC:4.1.3.34) id=24647284 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
aceB; malate synthase (EC:2.3.3.9)
Citrate lyase beta subunit {ECO:0000313|EMBL:ERH08431.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_8_scaffold_523_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13020..14021
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBM5_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA30498.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
membrane protein
sw_8_scaffold_523_14
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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14360..14599
DNA (240bp) protein (80aa)
Transposase (ISH1) n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0ALP3_9EURY
Transposase (ISH1) {ECO:0000313|EMBL:ELY99630.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
transposase
sw_8_scaffold_523_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14831..16261
DNA (1431bp) protein (477aa)
Dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZJ1_9EURY
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:EFW90112.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Hala
glycosyl transferase family 2
sw_8_scaffold_523_16
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16266..17321)
DNA (1056bp) protein (352aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C7E0_9EURY
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ELZ19140.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena s
nucleoside-diphosphate-sugar epimerase
sw_8_scaffold_523_17

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17611..17727
DNA (117bp) protein (39aa)
Glycosyl transferase family 2 n=1 Tax=halophilic archaeon DL31 RepID=G2MQ61_9ARCH
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEN07830.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Displaying 17 items

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